RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 Q6YL49 198 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 C6orf223Q8N319 242 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 NDUFC1O43677 76 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 HAMPP81172 84 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 C6orf99Q4VX62 202 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 Q6ZVQ6 151 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
SRRT-217ENST00000618411 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 CXCL6P80162 114 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 COX17Q14061 63 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
SRRT-217ENST00000618411 MAP1AP78559 2803 aaPredicted RBP10.43□□□□□ -0.74
SRRT-217ENST00000618411 J3QLI3 93 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 SNURFQ9Y675 71 aa10.43□□□□□ -0.74
SRRT-217ENST00000618411 F8WEM9 126 aa10.42□□□□□ -0.74
SRRT-217ENST00000618411 KHDC1LQ5JSQ8 128 aa10.42□□□□□ -0.74
SRRT-217ENST00000618411 RMI2Q96E14 147 aa10.42□□□□□ -0.74
SRRT-217ENST00000618411 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
SRRT-217ENST00000618411 PDE6GP18545 87 aa10.42□□□□□ -0.74
SRRT-217ENST00000618411 LAMTOR3Q9UHA4 124 aa10.41□□□□□ -0.74
SRRT-217ENST00000618411 IGF2RP11717 2491 aa10.4□□□□□ -0.74
SRRT-217ENST00000618411 ATP5EP56381 51 aaPredicted RBP10.4□□□□□ -0.74
SRRT-217ENST00000618411 DSCR9P59020 149 aa10.4□□□□□ -0.75
SRRT-217ENST00000618411 C9orf66Q5T8R8 295 aa10.39□□□□□ -0.75
SRRT-217ENST00000618411 NOTCH3Q9UM47 2321 aa10.39□□□□□ -0.75
SRRT-217ENST00000618411 M0R2N4 97 aa10.39□□□□□ -0.75
SRRT-217ENST00000618411 C1orf43Q9BWL3 253 aa10.39□□□□□ -0.75
SRRT-217ENST00000618411 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
SRRT-217ENST00000618411 H3BQ85 93 aa10.38□□□□□ -0.75
SRRT-217ENST00000618411 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
SRRT-217ENST00000618411 Q8N3U1 123 aa10.37□□□□□ -0.75
SRRT-217ENST00000618411 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
SRRT-217ENST00000618411 KIAA0087Q14695 138 aa10.37□□□□□ -0.75
SRRT-217ENST00000618411 IGHV4-28A0A0C4DH34 117 aa10.36□□□□□ -0.75
SRRT-217ENST00000618411 TRBV7-4A0A0J9YYF1 115 aa10.36□□□□□ -0.75
SRRT-217ENST00000618411 FSHBP01225 129 aa10.36□□□□□ -0.75
SRRT-217ENST00000618411 MUC6Q6W4X9 2439 aa10.35□□□□□ -0.75
SRRT-217ENST00000618411 CELSR2Q9HCU4 2923 aa10.34□□□□□ -0.75
SRRT-217ENST00000618411 MIFP14174 115 aa10.34□□□□□ -0.75
SRRT-217ENST00000618411 GNLYP22749 145 aa10.34□□□□□ -0.75
SRRT-217ENST00000618411 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
SRRT-217ENST00000618411 Q8NDZ9 215 aa10.33□□□□□ -0.76
SRRT-217ENST00000618411 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
SRRT-217ENST00000618411 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
SRRT-217ENST00000618411 ZNF843Q8N446 348 aa10.33□□□□□ -0.76
SRRT-217ENST00000618411 WFDC11Q8NEX6 87 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 LINC00474Q9P2X8 69 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 ERC2-IT1O76042 136 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 Q6ZQY7 126 aa10.32□□□□□ -0.76
SRRT-217ENST00000618411 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
SRRT-217ENST00000618411 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
SRRT-217ENST00000618411 CLPSL2Q6UWE3 100 aa10.31□□□□□ -0.76
SRRT-217ENST00000618411 PLA2G2AP14555 144 aa10.3□□□□□ -0.76
SRRT-217ENST00000618411 NREPQ16612 68 aa10.3□□□□□ -0.76
SRRT-217ENST00000618411 CSNK1G2-AS1Q8NCQ2 148 aa10.3□□□□□ -0.76
SRRT-217ENST00000618411 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
SRRT-217ENST00000618411 IGLV6-57P01721 117 aa10.29□□□□□ -0.76
SRRT-217ENST00000618411 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
SRRT-217ENST00000618411 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 MXRA5Q9NR99 2828 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 MYO9AB2RTY4 2548 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 F8WDY8 70 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 GYPEP15421 78 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
SRRT-217ENST00000618411 WNK1Q9H4A3 2382 aa10.27□□□□□ -0.77
SRRT-217ENST00000618411 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
SRRT-217ENST00000618411 BPY2O14599 106 aa10.26□□□□□ -0.77
SRRT-217ENST00000618411 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
SRRT-217ENST00000618411 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
SRRT-217ENST00000618411 CCL24O00175 119 aa10.25□□□□□ -0.77
SRRT-217ENST00000618411 BRK1Q8WUW1 75 aa10.25□□□□□ -0.77
SRRT-217ENST00000618411 CHD6Q8TD26 2715 aa10.25□□□□□ -0.77
SRRT-217ENST00000618411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
SRRT-217ENST00000618411 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
SRRT-217ENST00000618411 WFDC10AQ9H1F0 79 aa10.24□□□□□ -0.77
SRRT-217ENST00000618411 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
SRRT-217ENST00000618411 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
SRRT-217ENST00000618411 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
SRRT-217ENST00000618411 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
SRRT-217ENST00000618411 CR1P17927 2039 aa10.23□□□□□ -0.77
SRRT-217ENST00000618411 LINC00612Q8N6U2 182 aa10.22□□□□□ -0.77
SRRT-217ENST00000618411 LINC01006Q8NI28 216 aa10.22□□□□□ -0.77
SRRT-217ENST00000618411 C19orf73Q9NVV2 129 aa10.22□□□□□ -0.77
SRRT-217ENST00000618411 CSMD2Q7Z408 3487 aa10.22□□□□□ -0.77
SRRT-217ENST00000618411 DIRC1Q969H9 104 aa10.22□□□□□ -0.77
SRRT-217ENST00000618411 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.78
SRRT-217ENST00000618411 A0A0J9YWU9 116 aa10.21□□□□□ -0.78
SRRT-217ENST00000618411 IGHV4-30-4P0DP06 118 aa10.21□□□□□ -0.78
SRRT-217ENST00000618411 REG3AQ06141 175 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 JMJD1CQ15652 2540 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 A0A0U1RQV1 116 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 PRO0255Q9UI72 69 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 PRYO14603 147 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 COX7BP24311 80 aa10.2□□□□□ -0.78
SRRT-217ENST00000618411 FAM229BQ4G0N7 80 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms