RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
CCDC144B-208ENST00000618081 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
CCDC144B-208ENST00000618081 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
CCDC144B-208ENST00000618081 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
CCDC144B-208ENST00000618081 PRM2P04554 102 aa8.08□□□□□ -1.12
CCDC144B-208ENST00000618081 C1orf134Q5TEV5 83 aa8.08□□□□□ -1.12
CCDC144B-208ENST00000618081 ZNF462Q96JM2 2506 aa8.08□□□□□ -1.12
CCDC144B-208ENST00000618081 Q6ZS46 218 aa8.08□□□□□ -1.12
CCDC144B-208ENST00000618081 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
CCDC144B-208ENST00000618081 Q9BRP9 147 aa8.07□□□□□ -1.12
CCDC144B-208ENST00000618081 NHLRC4P0CG21 123 aaPredicted RBP8.07□□□□□ -1.12
CCDC144B-208ENST00000618081 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
CCDC144B-208ENST00000618081 IGLV1-51P01701 117 aa8.06□□□□□ -1.12
CCDC144B-208ENST00000618081 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
CCDC144B-208ENST00000618081 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
CCDC144B-208ENST00000618081 CELA1Q9UNI1 258 aa8.06□□□□□ -1.12
CCDC144B-208ENST00000618081 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
CCDC144B-208ENST00000618081 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
CCDC144B-208ENST00000618081 SRCAPQ6ZRS2 3230 aa8.05□□□□□ -1.12
CCDC144B-208ENST00000618081 SMR3AQ99954 134 aa8.05□□□□□ -1.12
CCDC144B-208ENST00000618081 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
CCDC144B-208ENST00000618081 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
CCDC144B-208ENST00000618081 IGIPA6NJ69 53 aa8.04□□□□□ -1.12
CCDC144B-208ENST00000618081 CRIP3Q6Q6R5 217 aa8.04□□□□□ -1.12
CCDC144B-208ENST00000618081 Q6ZTC4 211 aa8.04□□□□□ -1.12
CCDC144B-208ENST00000618081 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
CCDC144B-208ENST00000618081 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
CCDC144B-208ENST00000618081 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
CCDC144B-208ENST00000618081 LINC00242Q5T6M2 205 aa8.03□□□□□ -1.12
CCDC144B-208ENST00000618081 C11orf21Q9P2W6 132 aa8.03□□□□□ -1.12
CCDC144B-208ENST00000618081 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.12
CCDC144B-208ENST00000618081 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
CCDC144B-208ENST00000618081 BRI3O95415 125 aa8.02□□□□□ -1.13
CCDC144B-208ENST00000618081 ODF3L2Q3SX64 289 aa8.02□□□□□ -1.13
CCDC144B-208ENST00000618081 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.13
CCDC144B-208ENST00000618081 H0Y9P7 68 aa8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 COX6A2Q02221 97 aa8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 FHL2Q14192 279 aa8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
CCDC144B-208ENST00000618081 LINC00575Q6W349 94 aa8□□□□□ -1.13
CCDC144B-208ENST00000618081 C1orf195Q5TG92 126 aa8□□□□□ -1.13
CCDC144B-208ENST00000618081 Q6Q795 121 aa8□□□□□ -1.13
CCDC144B-208ENST00000618081 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
CCDC144B-208ENST00000618081 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
CCDC144B-208ENST00000618081 CENPFP49454 3210 aa7.99□□□□□ -1.13
CCDC144B-208ENST00000618081 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
CCDC144B-208ENST00000618081 EP400Q96L91 3159 aa7.99□□□□□ -1.13
CCDC144B-208ENST00000618081 PRR3P79522 188 aaKnown RBP7.98□□□□□ -1.13
CCDC144B-208ENST00000618081 A0A087WYN8 130 aa7.98□□□□□ -1.13
CCDC144B-208ENST00000618081 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
CCDC144B-208ENST00000618081 YPEL4Q96NS1 127 aa7.98□□□□□ -1.13
CCDC144B-208ENST00000618081 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
CCDC144B-208ENST00000618081 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 SPINK1P00995 79 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 MTORP42345 2549 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 Q8N2B8 174 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 HCG22E2RYF7 251 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 AVPP01185 164 aa7.97□□□□□ -1.13
CCDC144B-208ENST00000618081 LYPD5Q6UWN5 251 aa7.96□□□□□ -1.13
CCDC144B-208ENST00000618081 GAS8-AS1O95177 125 aa7.96□□□□□ -1.14
CCDC144B-208ENST00000618081 Q8N3U1 123 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 TRBV7-7A0A0K0K1E9 115 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 A0A087WSZ3 146 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 CDSNQ15517 529 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 AMELXQ99217 191 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
CCDC144B-208ENST00000618081 POLQO75417 2590 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 BPTFQ12830 3046 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 BEAN1Q3B7T3 259 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 EDN2P20800 178 aa7.94□□□□□ -1.14
CCDC144B-208ENST00000618081 XGP55808 180 aa7.93□□□□□ -1.14
CCDC144B-208ENST00000618081 FHL3Q13643 280 aa7.92□□□□□ -1.14
CCDC144B-208ENST00000618081 CXCL6P80162 114 aa7.92□□□□□ -1.14
CCDC144B-208ENST00000618081 PRLHP81277 87 aa7.92□□□□□ -1.14
CCDC144B-208ENST00000618081 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
CCDC144B-208ENST00000618081 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
CCDC144B-208ENST00000618081 USP24Q9UPU5 2620 aa7.91□□□□□ -1.14
CCDC144B-208ENST00000618081 FASNP49327 2511 aaKnown RBP7.91□□□□□ -1.14
CCDC144B-208ENST00000618081 CRYGAP11844 174 aa7.91□□□□□ -1.14
CCDC144B-208ENST00000618081 SOSTDC1Q6X4U4 206 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 DEFB116Q30KQ4 102 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 CHD8Q9HCK8 2581 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 KRTAP10-9P60411 292 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 PSPHP1O15172 72 aa7.9□□□□□ -1.14
CCDC144B-208ENST00000618081 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.15
CCDC144B-208ENST00000618081 PRRC2CQ9Y520 2896 aaKnown RBP7.89□□□□□ -1.15
CCDC144B-208ENST00000618081 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
CCDC144B-208ENST00000618081 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
CCDC144B-208ENST00000618081 C1orf64Q8NEQ6 169 aa7.88□□□□□ -1.15
CCDC144B-208ENST00000618081 Q6ZRU5 148 aa7.88□□□□□ -1.15
CCDC144B-208ENST00000618081 MDFIQ99750 246 aa7.87□□□□□ -1.15
CCDC144B-208ENST00000618081 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
CCDC144B-208ENST00000618081 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms