RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 COX7A2LO14548 114 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 CSNK1G2-AS1Q8NCQ2 148 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 PYGO1Q9Y3Y4 419 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 A0A087WVE0 104 aa8.09□□□□□ -1.11
PCDHGA9-202ENST00000616887 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
PCDHGA9-202ENST00000616887 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 LOC100131303A0A0U1RQF7 123 aa8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 KRTAP24-1Q3LI83 254 aa8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
PCDHGA9-202ENST00000616887 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
PCDHGA9-202ENST00000616887 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
PCDHGA9-202ENST00000616887 TINCRA0A1B0GVN0 87 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 Q9HAA7 133 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 TRGV2A0A075B6R0 118 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 FAM218AQ96MZ4 157 aa8.06□□□□□ -1.12
PCDHGA9-202ENST00000616887 NTM-AS1Q6ZSK4 140 aa8.05□□□□□ -1.12
PCDHGA9-202ENST00000616887 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
PCDHGA9-202ENST00000616887 USP17L23D6RBM5 183 aa8.05□□□□□ -1.12
PCDHGA9-202ENST00000616887 K7EQD1 137 aa8.05□□□□□ -1.12
PCDHGA9-202ENST00000616887 MALP21145 153 aa8.05□□□□□ -1.12
PCDHGA9-202ENST00000616887 LINC00308Q8TCZ7 52 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 C16orf74Q96GX8 76 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 ANK2Q01484 3957 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 DNAL4O96015 105 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 FHL2Q14192 279 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 LINC01561Q8N1V8 128 aa8.04□□□□□ -1.12
PCDHGA9-202ENST00000616887 COL6A5A8TX70 2615 aa8.03□□□□□ -1.12
PCDHGA9-202ENST00000616887 V9GYY9 64 aa8.03□□□□□ -1.12
PCDHGA9-202ENST00000616887 TIMM17BO60830 172 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 DEFB130BP0DP73 79 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 DEFB130AP0DP74 79 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 PFN2P35080 140 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 CIRBPQ14011 172 aaKnown RBP8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 DEFB4AO15263 64 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 RPL36AP83881 106 aaKnown RBP8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 RPL36ALQ969Q0 106 aaKnown RBP8.02□□□□□ -1.13
PCDHGA9-202ENST00000616887 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
PCDHGA9-202ENST00000616887 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
PCDHGA9-202ENST00000616887 MDFIQ99750 246 aa8.01□□□□□ -1.13
PCDHGA9-202ENST00000616887 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
PCDHGA9-202ENST00000616887 Q6JHZ5 121 aa8□□□□□ -1.13
PCDHGA9-202ENST00000616887 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
PCDHGA9-202ENST00000616887 STAB1Q9NY15 2570 aa8□□□□□ -1.13
PCDHGA9-202ENST00000616887 COX6A2Q02221 97 aa8□□□□□ -1.13
PCDHGA9-202ENST00000616887 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
PCDHGA9-202ENST00000616887 TRGV4A0A0C4DH28 118 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 NDUFA1O15239 70 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 DEFB135Q30KP9 77 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 Q9H8V8 135 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 X6R8D5 127 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 DGAT2L7PQ6IED9 249 aa7.99□□□□□ -1.13
PCDHGA9-202ENST00000616887 PKD1L1Q8TDX9 2849 aa7.98□□□□□ -1.13
PCDHGA9-202ENST00000616887 TRBV10-1A0A0K0K1A3 114 aa7.98□□□□□ -1.13
PCDHGA9-202ENST00000616887 TMEM243Q9BU79 118 aa7.97□□□□□ -1.13
PCDHGA9-202ENST00000616887 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
PCDHGA9-202ENST00000616887 WFDC9Q8NEX5 89 aa7.97□□□□□ -1.13
PCDHGA9-202ENST00000616887 A0A096LPF7 62 aa7.96□□□□□ -1.14
PCDHGA9-202ENST00000616887 GHRHP01286 108 aa7.96□□□□□ -1.14
PCDHGA9-202ENST00000616887 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
PCDHGA9-202ENST00000616887 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 TRBV6-4A0A1B0GX49 114 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 NDUFC2O95298 119 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 CMYA5Q8N3K9 4069 aa7.95□□□□□ -1.14
PCDHGA9-202ENST00000616887 A0A087WYN8 130 aa7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 FAM236DA0A1B0GTK5 79 aa7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 FAM236CP0DP71 79 aa7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 NCR3O14931 201 aa7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 CDC42SE2Q9NRR3 84 aa7.94□□□□□ -1.14
PCDHGA9-202ENST00000616887 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
PCDHGA9-202ENST00000616887 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
PCDHGA9-202ENST00000616887 UBE2L6O14933 153 aa7.93□□□□□ -1.14
PCDHGA9-202ENST00000616887 COPS9Q8WXC6 57 aa7.93□□□□□ -1.14
PCDHGA9-202ENST00000616887 CELA1Q9UNI1 258 aa7.92□□□□□ -1.14
PCDHGA9-202ENST00000616887 GYPEP15421 78 aa7.92□□□□□ -1.14
PCDHGA9-202ENST00000616887 XCL1P47992 114 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 TRBV6-8A0A0A6YYG3 113 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
PCDHGA9-202ENST00000616887 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.14
PCDHGA9-202ENST00000616887 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.15
PCDHGA9-202ENST00000616887 SLPIP03973 132 aa7.9□□□□□ -1.15
PCDHGA9-202ENST00000616887 IGHV4-30-4P0DP06 118 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms