RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 A0A087WSZ3 146 aa13.31□□□□□ -0.28
GABPB1-212ENST00000615671 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
GABPB1-212ENST00000615671 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
GABPB1-212ENST00000615671 ATG2AQ2TAZ0 1938 aa13.3□□□□□ -0.28
GABPB1-212ENST00000615671 A0A087WVE0 104 aa13.3□□□□□ -0.28
GABPB1-212ENST00000615671 SRCAPQ6ZRS2 3230 aa13.29□□□□□ -0.28
GABPB1-212ENST00000615671 MDFIQ99750 246 aa13.29□□□□□ -0.28
GABPB1-212ENST00000615671 TSPEAR-AS2P59090 65 aa13.28□□□□□ -0.28
GABPB1-212ENST00000615671 LINC00575Q6W349 94 aa13.28□□□□□ -0.28
GABPB1-212ENST00000615671 Q6ZRU5 148 aa13.28□□□□□ -0.28
GABPB1-212ENST00000615671 BEAN1Q3B7T3 259 aa13.28□□□□□ -0.28
GABPB1-212ENST00000615671 NDUFC1O43677 76 aa13.27□□□□□ -0.29
GABPB1-212ENST00000615671 FHL3Q13643 280 aa13.26□□□□□ -0.29
GABPB1-212ENST00000615671 ADAMTSL4-AS1Q5T5F5 129 aa13.26□□□□□ -0.29
GABPB1-212ENST00000615671 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
GABPB1-212ENST00000615671 IGKV2D-30A0A075B6S6 120 aa13.24□□□□□ -0.29
GABPB1-212ENST00000615671 IGKV2-30P06310 120 aa13.24□□□□□ -0.29
GABPB1-212ENST00000615671 ATP5EP56381 51 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-212ENST00000615671 HCG22E2RYF7 251 aa13.22□□□□□ -0.29
GABPB1-212ENST00000615671 H0Y9P7 68 aa13.22□□□□□ -0.29
GABPB1-212ENST00000615671 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.29
GABPB1-212ENST00000615671 TET2Q6N021 2002 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-212ENST00000615671 Q6JHZ5 121 aa13.21□□□□□ -0.3
GABPB1-212ENST00000615671 COX7CP15954 63 aa13.2□□□□□ -0.3
GABPB1-212ENST00000615671 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-212ENST00000615671 Q9UF83 564 aa13.2□□□□□ -0.3
GABPB1-212ENST00000615671 ACACBO00763 2458 aa13.19□□□□□ -0.3
GABPB1-212ENST00000615671 EML5Q05BV3 1969 aa13.19□□□□□ -0.3
GABPB1-212ENST00000615671 C22orf24Q9Y442 160 aa13.19□□□□□ -0.3
GABPB1-212ENST00000615671 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
GABPB1-212ENST00000615671 SMCR5Q8TEV8 140 aa13.19□□□□□ -0.3
GABPB1-212ENST00000615671 ATRXP46100 2492 aa13.18□□□□□ -0.3
GABPB1-212ENST00000615671 LRP4O75096 1905 aa13.18□□□□□ -0.3
GABPB1-212ENST00000615671 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
GABPB1-212ENST00000615671 CRYGAP11844 174 aa13.18□□□□□ -0.3
GABPB1-212ENST00000615671 PSPHP1O15172 72 aa13.17□□□□□ -0.3
GABPB1-212ENST00000615671 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
GABPB1-212ENST00000615671 CHTF8P0CG12 524 aa13.17□□□□□ -0.3
GABPB1-212ENST00000615671 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-212ENST00000615671 LIMD2Q9BT23 127 aa13.16□□□□□ -0.3
GABPB1-212ENST00000615671 C7orf65Q6ZTY9 151 aa13.16□□□□□ -0.3
GABPB1-212ENST00000615671 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
GABPB1-212ENST00000615671 CNFNQ9BYD5 112 aa13.14□□□□□ -0.31
GABPB1-212ENST00000615671 MOBPQ13875 183 aa13.14□□□□□ -0.31
GABPB1-212ENST00000615671 AGRNO00468 2067 aa13.14□□□□□ -0.31
GABPB1-212ENST00000615671 Q8N3U1 123 aa13.13□□□□□ -0.31
GABPB1-212ENST00000615671 URB1-AS1Q96HZ7 61 aa13.13□□□□□ -0.31
GABPB1-212ENST00000615671 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
GABPB1-212ENST00000615671 TTC28Q96AY4 2481 aa13.12□□□□□ -0.31
GABPB1-212ENST00000615671 IMUPQ9GZP8 106 aa13.12□□□□□ -0.31
GABPB1-212ENST00000615671 PLA2G1BP04054 148 aaKnown RBP13.11□□□□□ -0.31
GABPB1-212ENST00000615671 TRAV7A0A075B6U4 112 aa13.11□□□□□ -0.31
GABPB1-212ENST00000615671 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
GABPB1-212ENST00000615671 AMELXQ99217 191 aa13.09□□□□□ -0.31
GABPB1-212ENST00000615671 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
GABPB1-212ENST00000615671 PHF5AQ7RTV0 110 aaKnown RBP13.06□□□□□ -0.32
GABPB1-212ENST00000615671 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
GABPB1-212ENST00000615671 A0A1B0GUV1 79 aa13.06□□□□□ -0.32
GABPB1-212ENST00000615671 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
GABPB1-212ENST00000615671 PMAIP1Q13794 54 aa13.05□□□□□ -0.32
GABPB1-212ENST00000615671 C1orf195Q5TG92 126 aa13.05□□□□□ -0.32
GABPB1-212ENST00000615671 NAV3Q8IVL0 2385 aa13.04□□□□□ -0.32
GABPB1-212ENST00000615671 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
GABPB1-212ENST00000615671 CSDC2Q9Y534 153 aaKnown RBP13.03□□□□□ -0.32
GABPB1-212ENST00000615671 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.32
GABPB1-212ENST00000615671 MUC4Q99102 2169 aa13.02□□□□□ -0.33
GABPB1-212ENST00000615671 RTL8CO15255 209 aa13.02□□□□□ -0.33
GABPB1-212ENST00000615671 LINC00310P59036 64 aa13.01□□□□□ -0.33
GABPB1-212ENST00000615671 C1orf64Q8NEQ6 169 aa13□□□□□ -0.33
GABPB1-212ENST00000615671 LINC00315P59091 139 aa13□□□□□ -0.33
GABPB1-212ENST00000615671 SMIM29Q86T20 159 aa13□□□□□ -0.33
GABPB1-212ENST00000615671 LINC00167Q96N53 147 aa13□□□□□ -0.33
GABPB1-212ENST00000615671 F8WDY8 70 aa12.99□□□□□ -0.33
GABPB1-212ENST00000615671 hDV103S1A0JD37 113 aa12.99□□□□□ -0.33
GABPB1-212ENST00000615671 J3QL48 77 aa12.99□□□□□ -0.33
GABPB1-212ENST00000615671 Q8N2B8 174 aa12.98□□□□□ -0.33
GABPB1-212ENST00000615671 SMIM26A0A096LP01 95 aa12.98□□□□□ -0.33
GABPB1-212ENST00000615671 CCDC168Q8NDH2 2452 aa12.97□□□□□ -0.33
GABPB1-212ENST00000615671 TYMSOSQ8TAI1 123 aa12.96□□□□□ -0.33
GABPB1-212ENST00000615671 LINC00846Q9NV44 126 aa12.95□□□□□ -0.34
GABPB1-212ENST00000615671 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
GABPB1-212ENST00000615671 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
GABPB1-212ENST00000615671 C6orf48Q9UBA6 75 aa12.94□□□□□ -0.34
GABPB1-212ENST00000615671 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
GABPB1-212ENST00000615671 IGLV8-61A0A075B6I0 122 aa12.93□□□□□ -0.34
GABPB1-212ENST00000615671 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
GABPB1-212ENST00000615671 A0A096LNJ9 63 aa12.91□□□□□ -0.34
GABPB1-212ENST00000615671 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
GABPB1-212ENST00000615671 TMEM254Q8TBM7 123 aa12.89□□□□□ -0.35
GABPB1-212ENST00000615671 Q96NJ1 140 aa12.88□□□□□ -0.35
GABPB1-212ENST00000615671 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
GABPB1-212ENST00000615671 NBDYA0A0U1RRE5 68 aa12.87□□□□□ -0.35
GABPB1-212ENST00000615671 A0A1B0GU69 56 aa12.87□□□□□ -0.35
GABPB1-212ENST00000615671 ST20-AS1Q8NBB2 130 aa12.86□□□□□ -0.35
GABPB1-212ENST00000615671 LINC01561Q8N1V8 128 aa12.86□□□□□ -0.35
GABPB1-212ENST00000615671 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
GABPB1-212ENST00000615671 LINC00313P59037 77 aa12.85□□□□□ -0.35
GABPB1-212ENST00000615671 IGF2RP11717 2491 aa12.84□□□□□ -0.35
GABPB1-212ENST00000615671 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
GABPB1-212ENST00000615671 NCOR2Q9Y618 2525 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms