RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 WFDC13Q8IUB5 93 aa10.46□□□□□ -0.73
SNPH-203ENST00000614659 A0A096LNI7 61 aa10.46□□□□□ -0.74
SNPH-203ENST00000614659 CYSRT1A8MQ03 144 aa10.46□□□□□ -0.74
SNPH-203ENST00000614659 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.74
SNPH-203ENST00000614659 Q8N814 137 aa10.46□□□□□ -0.74
SNPH-203ENST00000614659 IGLV5-52A0A0A0MRZ9 124 aa10.45□□□□□ -0.74
SNPH-203ENST00000614659 Q6ZSN1 163 aa10.45□□□□□ -0.74
SNPH-203ENST00000614659 KRTAP24-1Q3LI83 254 aa10.45□□□□□ -0.74
SNPH-203ENST00000614659 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
SNPH-203ENST00000614659 PCSK5Q92824 1860 aa10.45□□□□□ -0.74
SNPH-203ENST00000614659 TLN1Q9Y490 2541 aaKnown RBP10.45□□□□□ -0.74
SNPH-203ENST00000614659 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
SNPH-203ENST00000614659 TET2Q6N021 2002 aaPredicted RBP10.44□□□□□ -0.74
SNPH-203ENST00000614659 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
SNPH-203ENST00000614659 PRR4Q16378 134 aa10.44□□□□□ -0.74
SNPH-203ENST00000614659 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
SNPH-203ENST00000614659 A0A087WVE0 104 aa10.43□□□□□ -0.74
SNPH-203ENST00000614659 IGKV2-28A0A075B6P5 120 aa10.42□□□□□ -0.74
SNPH-203ENST00000614659 IGKV2D-28P01615 120 aa10.42□□□□□ -0.74
SNPH-203ENST00000614659 Q8N9L7 120 aa10.41□□□□□ -0.74
SNPH-203ENST00000614659 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
SNPH-203ENST00000614659 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
SNPH-203ENST00000614659 A0A087WYN8 130 aa10.39□□□□□ -0.75
SNPH-203ENST00000614659 UNQ6190/PRO20217Q6UXQ8 127 aa10.39□□□□□ -0.75
SNPH-203ENST00000614659 PRYO14603 147 aa10.38□□□□□ -0.75
SNPH-203ENST00000614659 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
SNPH-203ENST00000614659 ARHGAP32A7KAX9 2087 aa10.38□□□□□ -0.75
SNPH-203ENST00000614659 PTPRBP23467 1997 aa10.37□□□□□ -0.75
SNPH-203ENST00000614659 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
SNPH-203ENST00000614659 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
SNPH-203ENST00000614659 PIEZO2Q9H5I5 2752 aa10.37□□□□□ -0.75
SNPH-203ENST00000614659 WNK1Q9H4A3 2382 aa10.36□□□□□ -0.75
SNPH-203ENST00000614659 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
SNPH-203ENST00000614659 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
SNPH-203ENST00000614659 H3BNG1 76 aa10.35□□□□□ -0.75
SNPH-203ENST00000614659 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
SNPH-203ENST00000614659 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
SNPH-203ENST00000614659 PRO0628Q9UI54 55 aa10.34□□□□□ -0.75
SNPH-203ENST00000614659 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
SNPH-203ENST00000614659 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
SNPH-203ENST00000614659 COL27A1Q8IZC6 1860 aaPredicted RBP10.33□□□□□ -0.76
SNPH-203ENST00000614659 Q8N3U1 123 aa10.32□□□□□ -0.76
SNPH-203ENST00000614659 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
SNPH-203ENST00000614659 WWC2-AS2Q96NR7 200 aa10.32□□□□□ -0.76
SNPH-203ENST00000614659 RPL37AP8A6NKH3 93 aa10.31□□□□□ -0.76
SNPH-203ENST00000614659 LINC00575Q6W349 94 aa10.31□□□□□ -0.76
SNPH-203ENST00000614659 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
SNPH-203ENST00000614659 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
SNPH-203ENST00000614659 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 MDFIQ99750 246 aa10.29□□□□□ -0.76
SNPH-203ENST00000614659 ANKRD11Q6UB99 2663 aaPredicted RBP10.28□□□□□ -0.76
SNPH-203ENST00000614659 REG3GQ6UW15 175 aa10.27□□□□□ -0.77
SNPH-203ENST00000614659 LINC00846Q9NV44 126 aa10.27□□□□□ -0.77
SNPH-203ENST00000614659 SPINK6Q6UWN8 80 aa10.27□□□□□ -0.77
SNPH-203ENST00000614659 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.77
SNPH-203ENST00000614659 MYO18BQ8IUG5 2567 aa10.26□□□□□ -0.77
SNPH-203ENST00000614659 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
SNPH-203ENST00000614659 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SNPH-203ENST00000614659 SRCAPQ6ZRS2 3230 aa10.26□□□□□ -0.77
SNPH-203ENST00000614659 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
SNPH-203ENST00000614659 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
SNPH-203ENST00000614659 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
SNPH-203ENST00000614659 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SNPH-203ENST00000614659 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
SNPH-203ENST00000614659 SMCPP49901 116 aaPredicted RBP10.24□□□□□ -0.77
SNPH-203ENST00000614659 A8MTW9 85 aa10.23□□□□□ -0.77
SNPH-203ENST00000614659 C6orf223Q8N319 242 aa10.23□□□□□ -0.77
SNPH-203ENST00000614659 PSPHP1O15172 72 aa10.23□□□□□ -0.77
SNPH-203ENST00000614659 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
SNPH-203ENST00000614659 CXCL6P80162 114 aa10.22□□□□□ -0.77
SNPH-203ENST00000614659 SORL1Q92673 2214 aa10.22□□□□□ -0.77
SNPH-203ENST00000614659 CRYGAP11844 174 aa10.22□□□□□ -0.77
SNPH-203ENST00000614659 BCE1O60756 84 aa10.22□□□□□ -0.77
SNPH-203ENST00000614659 CEP295Q9C0D2 2601 aa10.22□□□□□ -0.77
SNPH-203ENST00000614659 IGLV9-49A0A0B4J1Y8 123 aa10.21□□□□□ -0.77
SNPH-203ENST00000614659 RPS28P62857 69 aaKnown RBP10.21□□□□□ -0.77
SNPH-203ENST00000614659 ESRGQ1W209 222 aa10.21□□□□□ -0.77
SNPH-203ENST00000614659 CHD8Q9HCK8 2581 aa10.2□□□□□ -0.78
SNPH-203ENST00000614659 A0A1B0GW54 56 aa10.19□□□□□ -0.78
SNPH-203ENST00000614659 H0Y9P7 68 aa10.17□□□□□ -0.78
SNPH-203ENST00000614659 Q6ZRU5 148 aa10.17□□□□□ -0.78
SNPH-203ENST00000614659 X6R8D5 127 aa10.16□□□□□ -0.78
SNPH-203ENST00000614659 LRRK2Q5S007 2527 aa10.15□□□□□ -0.78
SNPH-203ENST00000614659 hDV103S1A0JD37 113 aa10.15□□□□□ -0.78
SNPH-203ENST00000614659 LITAFQ99732 161 aa10.15□□□□□ -0.78
SNPH-203ENST00000614659 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
SNPH-203ENST00000614659 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
SNPH-203ENST00000614659 A0A096LNT2 108 aa10.14□□□□□ -0.79
SNPH-203ENST00000614659 SPTBN4Q9H254 2564 aa10.14□□□□□ -0.79
SNPH-203ENST00000614659 LIMD2Q9BT23 127 aa10.13□□□□□ -0.79
SNPH-203ENST00000614659 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
SNPH-203ENST00000614659 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
SNPH-203ENST00000614659 JMJD1CQ15652 2540 aa10.12□□□□□ -0.79
SNPH-203ENST00000614659 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
SNPH-203ENST00000614659 WDR87Q6ZQQ6 2873 aa10.12□□□□□ -0.79
SNPH-203ENST00000614659 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms