RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 COX11Q9Y6N1 276 aa5.61□□□□□ -1.51
PSMB3-208ENST00000613870 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 HNRNPA3P51991 378 aaKnown RBP5.6□□□□□ -1.51
PSMB3-208ENST00000613870 TSPEAR-AS2P59090 65 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 LINC01561Q8N1V8 128 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 MIEN1Q9BRT3 115 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 NDUFA12Q9UI09 145 aa5.6□□□□□ -1.51
PSMB3-208ENST00000613870 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 LECT2O14960 151 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 RTL8CO15255 209 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 DDTP30046 118 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 Q6ZR54 194 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 MAPKAPK5-AS1Q8N8E1 139 aa5.59□□□□□ -1.51
PSMB3-208ENST00000613870 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
PSMB3-208ENST00000613870 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 KRTAP26-1Q6PEX3 210 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 LINC00526Q96FQ7 95 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 DNAH5Q8TE73 4624 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
PSMB3-208ENST00000613870 USP17L23D6RBM5 183 aa5.57□□□□□ -1.52
PSMB3-208ENST00000613870 NDUFA1O15239 70 aa5.57□□□□□ -1.52
PSMB3-208ENST00000613870 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
PSMB3-208ENST00000613870 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
PSMB3-208ENST00000613870 Q8IZM0 81 aa5.57□□□□□ -1.52
PSMB3-208ENST00000613870 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
PSMB3-208ENST00000613870 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 DLEU1O43261 78 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 HERV-K104P63124 156 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 SFTA2Q6UW10 78 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 CAMK2N2Q96S95 79 aa5.56□□□□□ -1.52
PSMB3-208ENST00000613870 RYR1P21817 5038 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 A0A0J9YXY3 114 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 CXCL5P42830 114 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 LINC00158P58513 81 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 SRSF9Q13242 221 aaKnown RBP eCLIP5.55□□□□□ -1.52
PSMB3-208ENST00000613870 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 HIST1H4GQ99525 98 aa5.55□□□□□ -1.52
PSMB3-208ENST00000613870 TMEM238C9JI98 176 aa5.54□□□□□ -1.52
PSMB3-208ENST00000613870 PFN2P35080 140 aa5.54□□□□□ -1.52
PSMB3-208ENST00000613870 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
PSMB3-208ENST00000613870 C14orf177Q52M58 125 aa5.54□□□□□ -1.52
PSMB3-208ENST00000613870 UNQ6190/PRO20217Q6UXQ8 127 aa5.54□□□□□ -1.52
PSMB3-208ENST00000613870 HSPG2P98160 4391 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 GVQW2A0A096LPI5 108 aaPredicted RBP5.53□□□□□ -1.52
PSMB3-208ENST00000613870 SMIM13P0DJ93 91 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 SYCNQ0VAF6 134 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 BATFQ16520 125 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 C2orf91Q6ZV80 131 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 NTN5Q8WTR8 489 aaPredicted RBP5.53□□□□□ -1.52
PSMB3-208ENST00000613870 C2orf48Q96LS8 159 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 ERG28Q9UKR5 140 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 CBY1Q9Y3M2 126 aa5.53□□□□□ -1.52
PSMB3-208ENST00000613870 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.52□□□□□ -1.53
PSMB3-208ENST00000613870 A0A1B0GV90 55 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 EREGO14944 169 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 GCSHP23434 173 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 NPC2P61916 151 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 CARD19Q96LW7 228 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
PSMB3-208ENST00000613870 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
PSMB3-208ENST00000613870 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.51□□□□□ -1.53
PSMB3-208ENST00000613870 F8WDY8 70 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 TIMM17BO60830 172 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 HINT1P49773 126 aaPredicted RBP5.51□□□□□ -1.53
PSMB3-208ENST00000613870 HSD52Q0P140 79 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 WFDC2Q14508 124 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
PSMB3-208ENST00000613870 Q6ZRU5 148 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 DAND5Q8N907 189 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
PSMB3-208ENST00000613870 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 M0R143 59 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 TNP2Q05952 138 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 Q6ZRN7 208 aaPredicted RBP5.5□□□□□ -1.53
PSMB3-208ENST00000613870 MIR7-3HGQ8N6C7 128 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 COPS9Q8WXC6 57 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 C6orf48Q9UBA6 75 aa5.5□□□□□ -1.53
PSMB3-208ENST00000613870 A0A087WTM6 91 aa5.49□□□□□ -1.53
PSMB3-208ENST00000613870 TAL2Q16559 108 aa5.49□□□□□ -1.53
PSMB3-208ENST00000613870 ADAMTSL4-AS1Q5T5F5 129 aa5.49□□□□□ -1.53
PSMB3-208ENST00000613870 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
PSMB3-208ENST00000613870 SPANXB1Q9NS25 103 aaPredicted RBP5.49□□□□□ -1.53
PSMB3-208ENST00000613870 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
PSMB3-208ENST00000613870 LRCOL1A6NCL2 159 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 RPL18AQ02543 176 aaKnown RBP5.48□□□□□ -1.53
PSMB3-208ENST00000613870 COX17Q14061 63 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 GAGE2EQ4V326 116 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms