RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 COX11Q9Y6N1 276 aa9.16□□□□□ -0.94
TMEM254-213ENST00000613758 LYSTQ99698 3801 aa9.15□□□□□ -0.94
TMEM254-213ENST00000613758 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
TMEM254-213ENST00000613758 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
TMEM254-213ENST00000613758 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
TMEM254-213ENST00000613758 APOMO95445 188 aa9.14□□□□□ -0.95
TMEM254-213ENST00000613758 Q6ZR54 194 aa9.14□□□□□ -0.95
TMEM254-213ENST00000613758 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
TMEM254-213ENST00000613758 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
TMEM254-213ENST00000613758 TOMM7Q9P0U1 55 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 K7ERJ3 54 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 TIMM17BO60830 172 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
TMEM254-213ENST00000613758 MUSTN1Q8IVN3 82 aa9.12□□□□□ -0.95
TMEM254-213ENST00000613758 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
TMEM254-213ENST00000613758 PSCAO43653 123 aa9.11□□□□□ -0.95
TMEM254-213ENST00000613758 PRSS2P07478 247 aa9.11□□□□□ -0.95
TMEM254-213ENST00000613758 HERV-K104P63124 156 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 Q8IZM0 81 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 C9orf118A6NHY6 69 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 KIAA0087Q14695 138 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
TMEM254-213ENST00000613758 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 A6NJY4 79 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
TMEM254-213ENST00000613758 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
TMEM254-213ENST00000613758 A4D1N5 150 aa9.08□□□□□ -0.96
TMEM254-213ENST00000613758 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
TMEM254-213ENST00000613758 DAND5Q8N907 189 aa9.08□□□□□ -0.96
TMEM254-213ENST00000613758 LINC00526Q96FQ7 95 aa9.08□□□□□ -0.96
TMEM254-213ENST00000613758 NAA38Q9BRA0 125 aaKnown RBP9.08□□□□□ -0.96
TMEM254-213ENST00000613758 CFC1BP0CG36 223 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 CFC1P0CG37 223 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 LCE6AA0A183 80 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 LECT2O14960 151 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 CKS1BP61024 79 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
TMEM254-213ENST00000613758 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
TMEM254-213ENST00000613758 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-213ENST00000613758 H3BUT2 72 aa9.06□□□□□ -0.96
TMEM254-213ENST00000613758 NPC2P61916 151 aa9.06□□□□□ -0.96
TMEM254-213ENST00000613758 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
TMEM254-213ENST00000613758 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
TMEM254-213ENST00000613758 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
TMEM254-213ENST00000613758 NTN5Q8WTR8 489 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-213ENST00000613758 IFITM1P13164 125 aa9.05□□□□□ -0.96
TMEM254-213ENST00000613758 CXCL5P42830 114 aa9.05□□□□□ -0.96
TMEM254-213ENST00000613758 WFDC2Q14508 124 aa9.05□□□□□ -0.96
TMEM254-213ENST00000613758 SOSTDC1Q6X4U4 206 aa9.05□□□□□ -0.96
TMEM254-213ENST00000613758 LINC00308Q8TCZ7 52 aa9.05□□□□□ -0.96
TMEM254-213ENST00000613758 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
TMEM254-213ENST00000613758 UNQ6190/PRO20217Q6UXQ8 127 aa9.03□□□□□ -0.96
TMEM254-213ENST00000613758 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
TMEM254-213ENST00000613758 LRCOL1A6NCL2 159 aa9.03□□□□□ -0.96
TMEM254-213ENST00000613758 CAMK2N2Q96S95 79 aa9.03□□□□□ -0.96
TMEM254-213ENST00000613758 A0A0B4J2C4 111 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 A0A1W2PPM0 123 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 VAMP3Q15836 100 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 F8WDY8 70 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 MIR7-3HGQ8N6C7 128 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 ERG28Q9UKR5 140 aa9.02□□□□□ -0.97
TMEM254-213ENST00000613758 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
TMEM254-213ENST00000613758 TSPAN13O95857 204 aa9.01□□□□□ -0.97
TMEM254-213ENST00000613758 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
TMEM254-213ENST00000613758 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
TMEM254-213ENST00000613758 KMT2AQ03164 3969 aa9.01□□□□□ -0.97
TMEM254-213ENST00000613758 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
TMEM254-213ENST00000613758 PRO1854Q9UHT4 67 aa9□□□□□ -0.97
TMEM254-213ENST00000613758 LINC00158P58513 81 aa9□□□□□ -0.97
TMEM254-213ENST00000613758 SYCNQ0VAF6 134 aa9□□□□□ -0.97
TMEM254-213ENST00000613758 Q6ZRU5 148 aa9□□□□□ -0.97
TMEM254-213ENST00000613758 SLPIP03973 132 aa8.99□□□□□ -0.97
TMEM254-213ENST00000613758 PFN2P35080 140 aa8.99□□□□□ -0.97
TMEM254-213ENST00000613758 UBE2V1Q13404 147 aa8.99□□□□□ -0.97
TMEM254-213ENST00000613758 C9orf116Q5BN46 136 aaPredicted RBP8.99□□□□□ -0.97
TMEM254-213ENST00000613758 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
TMEM254-213ENST00000613758 A0A087WTM6 91 aa8.98□□□□□ -0.97
TMEM254-213ENST00000613758 DNAH6Q9C0G6 4158 aa8.98□□□□□ -0.97
TMEM254-213ENST00000613758 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 RTL8CO15255 209 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 FABP2P12104 132 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 CARD19Q96LW7 228 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
TMEM254-213ENST00000613758 K7EP34 96 aa8.96□□□□□ -0.97
TMEM254-213ENST00000613758 Q8N814 137 aa8.96□□□□□ -0.97
TMEM254-213ENST00000613758 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.96□□□□□ -0.98
TMEM254-213ENST00000613758 GAGE10A6NGK3 116 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms