RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
TPM3-223ENST00000611659 RPL35AP18077 110 aaKnown RBP8.36□□□□□ -1.07
TPM3-223ENST00000611659 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
TPM3-223ENST00000611659 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
TPM3-223ENST00000611659 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
TPM3-223ENST00000611659 CCKP06307 115 aa8.36□□□□□ -1.07
TPM3-223ENST00000611659 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
TPM3-223ENST00000611659 J3QLI3 93 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 KRTAP10-9P60411 292 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 A0A087WZ39 114 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 GHRHP01286 108 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 DSCR9P59020 149 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 SS18Q15532 418 aa8.35□□□□□ -1.07
TPM3-223ENST00000611659 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
TPM3-223ENST00000611659 FAM19A1Q7Z5A9 133 aa8.34□□□□□ -1.07
TPM3-223ENST00000611659 TMEM86BQ8N661 226 aa8.34□□□□□ -1.07
TPM3-223ENST00000611659 OXTP01178 125 aa8.33□□□□□ -1.08
TPM3-223ENST00000611659 FHL2Q14192 279 aa8.33□□□□□ -1.08
TPM3-223ENST00000611659 ACANP16112 2415 aa8.33□□□□□ -1.08
TPM3-223ENST00000611659 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
TPM3-223ENST00000611659 MTORP42345 2549 aa8.32□□□□□ -1.08
TPM3-223ENST00000611659 S100A7L2Q5SY68 101 aa8.32□□□□□ -1.08
TPM3-223ENST00000611659 C16orf74Q96GX8 76 aa8.32□□□□□ -1.08
TPM3-223ENST00000611659 AKAP9Q99996 3911 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 JMJD7-PLA2G4BH0Y9G9 81 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 Q8N814 137 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
TPM3-223ENST00000611659 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 DEFB130BP0DP73 79 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 DEFB130AP0DP74 79 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 C4orf26Q17RF5 130 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 C20orf197Q8N268 126 aa8.31□□□□□ -1.08
TPM3-223ENST00000611659 A0A096LNT2 108 aa8.3□□□□□ -1.08
TPM3-223ENST00000611659 A0A096LPF7 62 aa8.3□□□□□ -1.08
TPM3-223ENST00000611659 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
TPM3-223ENST00000611659 LY6G6DO95868 133 aa8.3□□□□□ -1.08
TPM3-223ENST00000611659 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
TPM3-223ENST00000611659 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
TPM3-223ENST00000611659 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
TPM3-223ENST00000611659 CCL24O00175 119 aa8.29□□□□□ -1.08
TPM3-223ENST00000611659 FN1P02751 2386 aaKnown RBP8.29□□□□□ -1.08
TPM3-223ENST00000611659 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
TPM3-223ENST00000611659 TRAV25A0A0B4J276 109 aa8.28□□□□□ -1.08
TPM3-223ENST00000611659 FSHBP01225 129 aa8.28□□□□□ -1.08
TPM3-223ENST00000611659 NANOS2P60321 138 aaKnown RBP8.28□□□□□ -1.08
TPM3-223ENST00000611659 C6orf99Q4VX62 202 aa8.27□□□□□ -1.08
TPM3-223ENST00000611659 USP24Q9UPU5 2620 aa8.27□□□□□ -1.09
TPM3-223ENST00000611659 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
TPM3-223ENST00000611659 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
TPM3-223ENST00000611659 SETXQ7Z333 2677 aaKnown RBP8.27□□□□□ -1.09
TPM3-223ENST00000611659 IGLV10-54A0A075B6I4 117 aa8.26□□□□□ -1.09
TPM3-223ENST00000611659 ATP5EP2Q5VTU8 51 aa8.26□□□□□ -1.09
TPM3-223ENST00000611659 LAMTOR3Q9UHA4 124 aa8.26□□□□□ -1.09
TPM3-223ENST00000611659 GYPEP15421 78 aa8.25□□□□□ -1.09
TPM3-223ENST00000611659 Q8IZM0 81 aa8.25□□□□□ -1.09
TPM3-223ENST00000611659 BBC3Q96PG8 261 aaPredicted RBP8.25□□□□□ -1.09
TPM3-223ENST00000611659 HAMPP81172 84 aa8.25□□□□□ -1.09
TPM3-223ENST00000611659 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
TPM3-223ENST00000611659 NDUFC2O95298 119 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 CR1P17927 2039 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 FLNAP21333 2647 aaKnown RBP8.23□□□□□ -1.09
TPM3-223ENST00000611659 RBM3P98179 157 aaKnown RBP8.23□□□□□ -1.09
TPM3-223ENST00000611659 Q5XG85 94 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 ITPR3Q14573 2671 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 APCP25054 2843 aa8.23□□□□□ -1.09
TPM3-223ENST00000611659 M0R2N4 97 aa8.22□□□□□ -1.09
TPM3-223ENST00000611659 FAM236DA0A1B0GTK5 79 aa8.21□□□□□ -1.09
TPM3-223ENST00000611659 FAM236CP0DP71 79 aa8.21□□□□□ -1.09
TPM3-223ENST00000611659 CSNK1G2-AS1Q8NCQ2 148 aa8.21□□□□□ -1.1
TPM3-223ENST00000611659 Q8NDZ9 215 aa8.21□□□□□ -1.1
TPM3-223ENST00000611659 NBEAL2Q6ZNJ1 2754 aa8.21□□□□□ -1.1
TPM3-223ENST00000611659 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
TPM3-223ENST00000611659 Q8N3U1 123 aa8.2□□□□□ -1.1
TPM3-223ENST00000611659 SNURFQ9Y675 71 aa8.2□□□□□ -1.1
TPM3-223ENST00000611659 LINC00575Q6W349 94 aa8.2□□□□□ -1.1
TPM3-223ENST00000611659 ANGP03950 147 aaKnown RBP8.19□□□□□ -1.1
TPM3-223ENST00000611659 Q6ZQT0 140 aa8.19□□□□□ -1.1
TPM3-223ENST00000611659 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
TPM3-223ENST00000611659 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 DNAJC9-AS1A6NH13 148 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 LINC01547P58512 204 aaPredicted RBP8.18□□□□□ -1.1
TPM3-223ENST00000611659 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 ESM1Q9NQ30 184 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 TRAV10A0A0B4J240 114 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 ZNF843Q8N446 348 aa8.18□□□□□ -1.1
TPM3-223ENST00000611659 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 CMC4P56277 68 aaPredicted RBP8.17□□□□□ -1.1
TPM3-223ENST00000611659 Q6ZQY7 126 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 Q6ZVQ6 151 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 COX17Q14061 63 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 DEFB113Q30KQ7 82 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms