RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 UBE2L6O14933 153 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 OXTP01178 125 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
FDPS-220ENST00000611010 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
FDPS-220ENST00000611010 LRP2P98164 4655 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 LELP1Q5T871 98 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 AMMECR1LQ6DCA0 310 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 HIST1H4GQ99525 98 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 GTSF1LQ9H1H1 148 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 COX11Q9Y6N1 276 aa7.71□□□□□ -1.18
FDPS-220ENST00000611010 LEPROTO15243 131 aa7.7□□□□□ -1.18
FDPS-220ENST00000611010 SMIM13P0DJ93 91 aa7.7□□□□□ -1.18
FDPS-220ENST00000611010 SH2D6Q7Z4S9 175 aa7.7□□□□□ -1.18
FDPS-220ENST00000611010 TMEM243Q9BU79 118 aa7.7□□□□□ -1.18
FDPS-220ENST00000611010 GEMIN7Q9H840 131 aaKnown RBP7.7□□□□□ -1.18
FDPS-220ENST00000611010 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
FDPS-220ENST00000611010 H3BRM9 83 aa7.69□□□□□ -1.18
FDPS-220ENST00000611010 H7C423 109 aa7.69□□□□□ -1.18
FDPS-220ENST00000611010 MT1HL1P0DM35 61 aa7.69□□□□□ -1.18
FDPS-220ENST00000611010 CEND1Q8N111 149 aa7.69□□□□□ -1.18
FDPS-220ENST00000611010 TINCRA0A1B0GVN0 87 aa7.68□□□□□ -1.18
FDPS-220ENST00000611010 J3QQQ9 107 aa7.68□□□□□ -1.18
FDPS-220ENST00000611010 TAX1BP3O14907 124 aa7.68□□□□□ -1.18
FDPS-220ENST00000611010 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
FDPS-220ENST00000611010 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
FDPS-220ENST00000611010 VAMP3Q15836 100 aa7.68□□□□□ -1.18
FDPS-220ENST00000611010 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
FDPS-220ENST00000611010 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
FDPS-220ENST00000611010 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
FDPS-220ENST00000611010 Q6ZUT4 128 aa7.67□□□□□ -1.18
FDPS-220ENST00000611010 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
FDPS-220ENST00000611010 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
FDPS-220ENST00000611010 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
FDPS-220ENST00000611010 UBE2D1P51668 147 aa7.65□□□□□ -1.18
FDPS-220ENST00000611010 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
FDPS-220ENST00000611010 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
FDPS-220ENST00000611010 TMEM238LA0A1B0GVL6 79 aa7.64□□□□□ -1.19
FDPS-220ENST00000611010 C9orf118A6NHY6 69 aa7.64□□□□□ -1.19
FDPS-220ENST00000611010 A6NJY4 79 aa7.64□□□□□ -1.19
FDPS-220ENST00000611010 HERVK_113P63121 156 aa7.64□□□□□ -1.19
FDPS-220ENST00000611010 CHCHD5Q9BSY4 110 aa7.64□□□□□ -1.19
FDPS-220ENST00000611010 IGHV3-64A0A075B6Q5 118 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 TRAV8-3A0A0A6YYJ7 113 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 FXYD2P54710 66 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 GAGE6Q13070 117 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 UBE2V1Q13404 147 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 Q6ZVH6 145 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 RAB37Q96AX2 223 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 CDC42SE2Q9NRR3 84 aa7.63□□□□□ -1.19
FDPS-220ENST00000611010 NHP2Q9NX24 153 aaKnown RBP7.63□□□□□ -1.19
FDPS-220ENST00000611010 TRAV13-1A0A0B4J241 112 aa7.62□□□□□ -1.19
FDPS-220ENST00000611010 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
FDPS-220ENST00000611010 PANO1I0J062 215 aa7.61□□□□□ -1.19
FDPS-220ENST00000611010 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
FDPS-220ENST00000611010 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
FDPS-220ENST00000611010 RPL37AP61513 92 aaKnown RBP7.61□□□□□ -1.19
FDPS-220ENST00000611010 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
FDPS-220ENST00000611010 GTF2H5Q6ZYL4 71 aa7.61□□□□□ -1.19
FDPS-220ENST00000611010 FAM19A3Q7Z5A8 133 aa7.61□□□□□ -1.19
FDPS-220ENST00000611010 IGKV2D-24A0A075B6R9 120 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 H3BUT2 72 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 NDUFA12Q9UI09 145 aa7.6□□□□□ -1.19
FDPS-220ENST00000611010 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
FDPS-220ENST00000611010 FABP2P12104 132 aa7.59□□□□□ -1.19
FDPS-220ENST00000611010 KLK12Q9UKR0 248 aa7.59□□□□□ -1.19
FDPS-220ENST00000611010 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
FDPS-220ENST00000611010 COX6A2Q02221 97 aa7.58□□□□□ -1.2
FDPS-220ENST00000611010 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
FDPS-220ENST00000611010 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
FDPS-220ENST00000611010 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
FDPS-220ENST00000611010 UBE2WQ96B02 151 aa7.57□□□□□ -1.2
FDPS-220ENST00000611010 IGKV3OR2-268A0A0C4DH90 116 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 K7ERJ3 54 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 CCL25O15444 150 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 SS18Q15532 418 aa7.56□□□□□ -1.2
FDPS-220ENST00000611010 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.55□□□□□ -1.2
FDPS-220ENST00000611010 A0A1B0GUV1 79 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 NDUFA1O15239 70 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 TIMM17BO60830 172 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 PRSS2P07478 247 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 ENHOQ6UWT2 76 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 RMI2Q96E14 147 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 NAA38Q9BRA0 125 aaKnown RBP7.55□□□□□ -1.2
FDPS-220ENST00000611010 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
FDPS-220ENST00000611010 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
FDPS-220ENST00000611010 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms