RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 CAMK2N2Q96S95 79 aa8.53□□□□□ -1.04
MUC1-222ENST00000610468 CYSLTR1Q9Y271 337 aa8.53□□□□□ -1.04
MUC1-222ENST00000610468 SMAGPQ0VAQ4 97 aa8.52□□□□□ -1.05
MUC1-222ENST00000610468 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
MUC1-222ENST00000610468 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
MUC1-222ENST00000610468 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
MUC1-222ENST00000610468 PSORS1C2Q9UIG4 136 aa8.52□□□□□ -1.05
MUC1-222ENST00000610468 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 IGHV3OR16-9A0A0B4J2B5 98 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 LINC00614P0C842 121 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 AKR1D1P51857 326 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
MUC1-222ENST00000610468 UBE2D1P51668 147 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 C5orf38Q86SI9 138 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
MUC1-222ENST00000610468 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
MUC1-222ENST00000610468 ERASQ7Z444 233 aa8.49□□□□□ -1.05
MUC1-222ENST00000610468 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
MUC1-222ENST00000610468 NUPR1O60356 82 aa8.48□□□□□ -1.05
MUC1-222ENST00000610468 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
MUC1-222ENST00000610468 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
MUC1-222ENST00000610468 CHCHD1Q96BP2 118 aaKnown RBP8.48□□□□□ -1.05
MUC1-222ENST00000610468 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
MUC1-222ENST00000610468 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
MUC1-222ENST00000610468 F8WDY8 70 aa8.47□□□□□ -1.05
MUC1-222ENST00000610468 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
MUC1-222ENST00000610468 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
MUC1-222ENST00000610468 IFITM10A6NMD0 228 aa8.46□□□□□ -1.06
MUC1-222ENST00000610468 C1orf137Q5JT78 98 aa8.46□□□□□ -1.06
MUC1-222ENST00000610468 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
MUC1-222ENST00000610468 FABP4P15090 132 aa8.45□□□□□ -1.06
MUC1-222ENST00000610468 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
MUC1-222ENST00000610468 SCGB3A1Q96QR1 104 aa8.45□□□□□ -1.06
MUC1-222ENST00000610468 A0A087WZ39 114 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 SERF1AO75920 110 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 G0S2P27469 103 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 VCX2Q9H322 139 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 CST9LQ9H4G1 147 aa8.44□□□□□ -1.06
MUC1-222ENST00000610468 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 HSBP1O75506 76 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 HBDP02042 147 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 LPAP08519 4548 aa8.43□□□□□ -1.06
MUC1-222ENST00000610468 FAM168BA1KXE4 195 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 H0Y9J4 135 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 NDUFA1O15239 70 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 C12orf57Q99622 126 aa8.42□□□□□ -1.06
MUC1-222ENST00000610468 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
MUC1-222ENST00000610468 LINC01561Q8N1V8 128 aa8.41□□□□□ -1.06
MUC1-222ENST00000610468 FAM19A2Q8N3H0 131 aa8.41□□□□□ -1.06
MUC1-222ENST00000610468 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
MUC1-222ENST00000610468 S100A12P80511 92 aa8.4□□□□□ -1.06
MUC1-222ENST00000610468 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
MUC1-222ENST00000610468 PMVKQ15126 192 aa8.4□□□□□ -1.06
MUC1-222ENST00000610468 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
MUC1-222ENST00000610468 Q6ZN92 141 aa8.4□□□□□ -1.06
MUC1-222ENST00000610468 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
MUC1-222ENST00000610468 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
MUC1-222ENST00000610468 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
MUC1-222ENST00000610468 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
MUC1-222ENST00000610468 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
MUC1-222ENST00000610468 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
MUC1-222ENST00000610468 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
MUC1-222ENST00000610468 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
MUC1-222ENST00000610468 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
MUC1-222ENST00000610468 M0QXV9 152 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 ATP5LO75964 103 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 HERVK_113P63121 156 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
MUC1-222ENST00000610468 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 C20orf202A1L168 122 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 SMIM1B2RUZ4 78 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
MUC1-222ENST00000610468 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
MUC1-222ENST00000610468 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
MUC1-222ENST00000610468 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
MUC1-222ENST00000610468 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
MUC1-222ENST00000610468 SEC11AP67812 179 aa8.34□□□□□ -1.07
MUC1-222ENST00000610468 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
MUC1-222ENST00000610468 MUC2Q02817 5179 aa8.34□□□□□ -1.07
MUC1-222ENST00000610468 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
MUC1-222ENST00000610468 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
MUC1-222ENST00000610468 UBE2BP63146 152 aa8.32□□□□□ -1.08
MUC1-222ENST00000610468 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms