RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
HDDC2-205ENST00000608456 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 KALRNO60229 2985 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 WDFY4Q6ZS81 3184 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 A0A087WVE0 104 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 H7BZZ5 65 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 IGLV1-51P01701 117 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 AKAP6Q13023 2319 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 CSPG4Q6UVK1 2322 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 C16orf95Q9H693 158 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 ESM1Q9NQ30 184 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 ADGRG4Q8IZF6 3080 aa4.42□□□□□ -1.7
HDDC2-205ENST00000608456 MGAQ8IWI9 3026 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 F8WDY8 70 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 LINC01547P58512 204 aaPredicted RBP4.41□□□□□ -1.7
HDDC2-205ENST00000608456 DEFB136Q30KP8 78 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 ENHOQ6UWT2 76 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 C18orf65Q6ZTR6 163 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 NBASA2RRP1 2371 aa4.41□□□□□ -1.7
HDDC2-205ENST00000608456 DMDP11532 3685 aa4.4□□□□□ -1.7
HDDC2-205ENST00000608456 TRAV23DV6A0A075B6W5 121 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 TRBV7-4A0A0J9YYF1 115 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 LYRM9A8MSI8 78 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 SLPIP03973 132 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 C6orf99Q4VX62 202 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 C20orf197Q8N268 126 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
HDDC2-205ENST00000608456 ZFHX2Q9C0A1 2572 aaPredicted RBP4.4□□□□□ -1.71
HDDC2-205ENST00000608456 Q6ZVQ6 151 aa4.39□□□□□ -1.71
HDDC2-205ENST00000608456 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
HDDC2-205ENST00000608456 OXTP01178 125 aa4.38□□□□□ -1.71
HDDC2-205ENST00000608456 HILS1P60008 231 aa4.38□□□□□ -1.71
HDDC2-205ENST00000608456 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
HDDC2-205ENST00000608456 CHCHD10Q8WYQ3 142 aaPredicted RBP4.38□□□□□ -1.71
HDDC2-205ENST00000608456 HRNRQ86YZ3 2850 aaPredicted RBP4.38□□□□□ -1.71
HDDC2-205ENST00000608456 COX7BP24311 80 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 DIRC1Q969H9 104 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 CELA1Q9UNI1 258 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 MUC6Q6W4X9 2439 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 AKAP13Q12802 2813 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 TACC2O95359 2948 aa4.37□□□□□ -1.71
HDDC2-205ENST00000608456 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
HDDC2-205ENST00000608456 HAMPP81172 84 aa4.36□□□□□ -1.71
HDDC2-205ENST00000608456 REG3AQ06141 175 aa4.36□□□□□ -1.71
HDDC2-205ENST00000608456 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
HDDC2-205ENST00000608456 PRR34Q9NV39 138 aa4.36□□□□□ -1.71
HDDC2-205ENST00000608456 DMXL2Q8TDJ6 3036 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 CFAP47Q6ZTR5 3102 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 MIFP14174 115 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 ELOF1P60002 83 aaKnown RBP4.35□□□□□ -1.71
HDDC2-205ENST00000608456 LELP1Q5T871 98 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 HRCT1Q6UXD1 115 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 ZFHX4Q86UP3 3567 aa4.35□□□□□ -1.71
HDDC2-205ENST00000608456 Q6ZQY7 126 aa4.34□□□□□ -1.71
HDDC2-205ENST00000608456 LINC00269Q8N2A0 174 aa4.34□□□□□ -1.71
HDDC2-205ENST00000608456 DOPEY1Q5JWR5 2465 aa4.34□□□□□ -1.72
HDDC2-205ENST00000608456 SPENQ96T58 3664 aaKnown RBP4.34□□□□□ -1.72
HDDC2-205ENST00000608456 BSNQ9UPA5 3926 aa4.34□□□□□ -1.72
HDDC2-205ENST00000608456 BOD1L1Q8NFC6 3051 aa4.33□□□□□ -1.72
HDDC2-205ENST00000608456 M0R378 163 aa4.33□□□□□ -1.72
HDDC2-205ENST00000608456 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
HDDC2-205ENST00000608456 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
HDDC2-205ENST00000608456 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
HDDC2-205ENST00000608456 EGFEM1PQ0D2K5 195 aa4.33□□□□□ -1.72
HDDC2-205ENST00000608456 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
HDDC2-205ENST00000608456 SMG1Q96Q15 3661 aaKnown RBP4.33□□□□□ -1.72
HDDC2-205ENST00000608456 CEP295Q9C0D2 2601 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 TRAV10A0A0B4J240 114 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 CYSRT1A8MQ03 144 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 F8WEM9 126 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 H3BNG1 76 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 BPY2O14599 106 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 ANGP03950 147 aaKnown RBP4.32□□□□□ -1.72
HDDC2-205ENST00000608456 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
HDDC2-205ENST00000608456 NREPQ16612 68 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 LINC01006Q8NI28 216 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 DCHS2Q6V1P9 2916 aa4.32□□□□□ -1.72
HDDC2-205ENST00000608456 ATRXP46100 2492 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 SPG11Q96JI7 2443 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 A0A0U1RQV1 116 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 LCE6AA0A183 80 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 DEFB130BP0DP73 79 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 DEFB130AP0DP74 79 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 LRBAP50851 2863 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 C2CD3Q4AC94 2353 aa4.31□□□□□ -1.72
HDDC2-205ENST00000608456 APOC4P55056 127 aa4.3□□□□□ -1.72
HDDC2-205ENST00000608456 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
HDDC2-205ENST00000608456 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
HDDC2-205ENST00000608456 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms