RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NDUFA4O00483 81 aa8.85□□□□□ -0.99
CTCFL-218ENST00000608440 PTPN13Q12923 2485 aa8.85□□□□□ -0.99
CTCFL-218ENST00000608440 Q6ZVQ6 151 aa8.84□□□□□ -0.99
CTCFL-218ENST00000608440 TMEM256-PLSCR3K7ERE1 68 aa8.84□□□□□ -0.99
CTCFL-218ENST00000608440 NREPQ16612 68 aa8.84□□□□□ -0.99
CTCFL-218ENST00000608440 FBN2P35556 2912 aa8.84□□□□□ -0.99
CTCFL-218ENST00000608440 C2CD3Q4AC94 2353 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 C6orf223Q8N319 242 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 K7EQG2 157 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 PSPHP1O15172 72 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 ZFP36P26651 326 aaKnown RBP8.83□□□□□ -1
CTCFL-218ENST00000608440 Q8N814 137 aa8.83□□□□□ -1
CTCFL-218ENST00000608440 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
CTCFL-218ENST00000608440 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
CTCFL-218ENST00000608440 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
CTCFL-218ENST00000608440 TENM4Q6N022 2769 aa8.82□□□□□ -1
CTCFL-218ENST00000608440 COX7B2Q8TF08 81 aa8.81□□□□□ -1
CTCFL-218ENST00000608440 CUBNO60494 3623 aa8.81□□□□□ -1
CTCFL-218ENST00000608440 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
CTCFL-218ENST00000608440 KLK9Q2XQG4 91 aa8.8□□□□□ -1
CTCFL-218ENST00000608440 Q6ZQT0 140 aa8.8□□□□□ -1
CTCFL-218ENST00000608440 LAMTOR3Q9UHA4 124 aa8.8□□□□□ -1
CTCFL-218ENST00000608440 LMO4P61968 165 aa8.79□□□□□ -1
CTCFL-218ENST00000608440 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
CTCFL-218ENST00000608440 C1orf158Q8N1D5 194 aa8.79□□□□□ -1
CTCFL-218ENST00000608440 PRYO14603 147 aa8.79□□□□□ -1
CTCFL-218ENST00000608440 Q6ZTC4 211 aa8.79□□□□□ -1
CTCFL-218ENST00000608440 HELZ2Q9BYK8 2649 aaKnown RBP8.79□□□□□ -1
CTCFL-218ENST00000608440 NAV2Q8IVL1 2488 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 A0A096LNT2 108 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 IGHV4-61A0A0C4DH41 118 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 A8MU10 97 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 BPY2O14599 106 aa8.78□□□□□ -1
CTCFL-218ENST00000608440 ANKRD17O75179 2603 aaKnown RBP8.77□□□□□ -1
CTCFL-218ENST00000608440 IGHV4-30-2A0A087WSY4 118 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 MINOS1-NBL1R4GNA1 71 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 ABCA2Q9BZC7 2435 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 KRTAP10-9P60411 292 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 Q6ZRP5 223 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
CTCFL-218ENST00000608440 PLA2G2AP14555 144 aa8.76□□□□□ -1.01
CTCFL-218ENST00000608440 HIGD2AQ9BW72 106 aa8.76□□□□□ -1.01
CTCFL-218ENST00000608440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.76□□□□□ -1.01
CTCFL-218ENST00000608440 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
CTCFL-218ENST00000608440 Q8N9L7 120 aa8.76□□□□□ -1.01
CTCFL-218ENST00000608440 CREBBPQ92793 2442 aa8.76□□□□□ -1.01
CTCFL-218ENST00000608440 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
CTCFL-218ENST00000608440 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
CTCFL-218ENST00000608440 NTM-AS1Q6ZSK4 140 aa8.75□□□□□ -1.01
CTCFL-218ENST00000608440 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
CTCFL-218ENST00000608440 J3QKU1 62 aa8.74□□□□□ -1.01
CTCFL-218ENST00000608440 CXCL6P80162 114 aa8.74□□□□□ -1.01
CTCFL-218ENST00000608440 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
CTCFL-218ENST00000608440 PRB2P02812 416 aaPredicted RBP8.73□□□□□ -1.01
CTCFL-218ENST00000608440 A8MTW9 85 aa8.73□□□□□ -1.01
CTCFL-218ENST00000608440 LY6G6DO95868 133 aa8.73□□□□□ -1.01
CTCFL-218ENST00000608440 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
CTCFL-218ENST00000608440 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
CTCFL-218ENST00000608440 LINC01356Q8N9X3 169 aa8.73□□□□□ -1.01
CTCFL-218ENST00000608440 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
CTCFL-218ENST00000608440 K7EQD1 137 aa8.72□□□□□ -1.01
CTCFL-218ENST00000608440 SPATA3Q8NHX4 192 aa8.72□□□□□ -1.01
CTCFL-218ENST00000608440 CSPG4Q6UVK1 2322 aa8.71□□□□□ -1.01
CTCFL-218ENST00000608440 ZANQ9Y493 2812 aa8.71□□□□□ -1.01
CTCFL-218ENST00000608440 APCP25054 2843 aa8.71□□□□□ -1.02
CTCFL-218ENST00000608440 C6orf99Q4VX62 202 aa8.71□□□□□ -1.02
CTCFL-218ENST00000608440 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
CTCFL-218ENST00000608440 MAPK1IP1LQ8NDC0 245 aa8.7□□□□□ -1.02
CTCFL-218ENST00000608440 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 Q1T7F1 81 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 CCDC168Q8NDH2 2452 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 UBE2L6O14933 153 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
CTCFL-218ENST00000608440 GCN1Q92616 2671 aaKnown RBP8.69□□□□□ -1.02
CTCFL-218ENST00000608440 MSMBP08118 114 aa8.68□□□□□ -1.02
CTCFL-218ENST00000608440 DSCR9P59020 149 aa8.68□□□□□ -1.02
CTCFL-218ENST00000608440 LY6EQ16553 131 aa8.68□□□□□ -1.02
CTCFL-218ENST00000608440 BRD3OSQ6XYD6 125 aa8.68□□□□□ -1.02
CTCFL-218ENST00000608440 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 A8MUN3 132 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 PRR4Q16378 134 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 DEFB113Q30KQ7 82 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 LINC01006Q8NI28 216 aa8.67□□□□□ -1.02
CTCFL-218ENST00000608440 USMG5Q96IX5 58 aa8.66□□□□□ -1.02
CTCFL-218ENST00000608440 FASNP49327 2511 aaKnown RBP8.66□□□□□ -1.02
CTCFL-218ENST00000608440 NBPF19A0A087WUL8 3843 aa8.66□□□□□ -1.02
CTCFL-218ENST00000608440 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
CTCFL-218ENST00000608440 HECTD1Q9ULT8 2610 aa8.65□□□□□ -1.02
CTCFL-218ENST00000608440 B4DSR2 109 aa8.65□□□□□ -1.02
CTCFL-218ENST00000608440 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
CTCFL-218ENST00000608440 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
CTCFL-218ENST00000608440 MUC7Q8TAX7 377 aa8.65□□□□□ -1.03
CTCFL-218ENST00000608440 UNC79Q9P2D8 2635 aa8.65□□□□□ -1.03
CTCFL-218ENST00000608440 LINC00575Q6W349 94 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms