RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 APOMO95445 188 aa9.03□□□□□ -0.96
SSBP4-214ENST00000607020 UBE2D1P51668 147 aa9.03□□□□□ -0.96
SSBP4-214ENST00000607020 PRR4Q16378 134 aa9.03□□□□□ -0.96
SSBP4-214ENST00000607020 ZC2HC1BQ5TFG8 222 aa9.03□□□□□ -0.96
SSBP4-214ENST00000607020 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
SSBP4-214ENST00000607020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-214ENST00000607020 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
SSBP4-214ENST00000607020 MALP21145 153 aa9.02□□□□□ -0.97
SSBP4-214ENST00000607020 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
SSBP4-214ENST00000607020 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
SSBP4-214ENST00000607020 C5orf38Q86SI9 138 aa9.02□□□□□ -0.97
SSBP4-214ENST00000607020 HBDP02042 147 aa9.01□□□□□ -0.97
SSBP4-214ENST00000607020 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
SSBP4-214ENST00000607020 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
SSBP4-214ENST00000607020 PMCHL1Q16048 86 aa9□□□□□ -0.97
SSBP4-214ENST00000607020 RNF151Q2KHN1 245 aa9□□□□□ -0.97
SSBP4-214ENST00000607020 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
SSBP4-214ENST00000607020 FAM19A3Q7Z5A8 133 aa8.99□□□□□ -0.97
SSBP4-214ENST00000607020 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
SSBP4-214ENST00000607020 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
SSBP4-214ENST00000607020 A0A087WZ39 114 aa8.98□□□□□ -0.97
SSBP4-214ENST00000607020 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
SSBP4-214ENST00000607020 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
SSBP4-214ENST00000607020 S100A1P23297 94 aa8.97□□□□□ -0.97
SSBP4-214ENST00000607020 SEC11AP67812 179 aa8.97□□□□□ -0.97
SSBP4-214ENST00000607020 OR10D4PQ8NGN7 298 aa8.97□□□□□ -0.97
SSBP4-214ENST00000607020 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
SSBP4-214ENST00000607020 HSBP1O75506 76 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 HERVK_113P63121 156 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 SPAG11BQ08648 103 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 PMVKQ15126 192 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
SSBP4-214ENST00000607020 ATP5LO75964 103 aa8.95□□□□□ -0.98
SSBP4-214ENST00000607020 LINC00310P59036 64 aa8.95□□□□□ -0.98
SSBP4-214ENST00000607020 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
SSBP4-214ENST00000607020 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
SSBP4-214ENST00000607020 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
SSBP4-214ENST00000607020 TINCRA0A1B0GVN0 87 aa8.94□□□□□ -0.98
SSBP4-214ENST00000607020 F8WDY8 70 aa8.94□□□□□ -0.98
SSBP4-214ENST00000607020 SERF1AO75920 110 aa8.94□□□□□ -0.98
SSBP4-214ENST00000607020 CDKN2A-AS1Q9UH64 79 aa8.94□□□□□ -0.98
SSBP4-214ENST00000607020 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
SSBP4-214ENST00000607020 MRPL35Q9NZE8 188 aaKnown RBP8.93□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 NDUFA6P56556 154 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-214ENST00000607020 LINC00469Q8N7U9 141 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
SSBP4-214ENST00000607020 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
SSBP4-214ENST00000607020 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
SSBP4-214ENST00000607020 NUPR1O60356 82 aa8.9□□□□□ -0.98
SSBP4-214ENST00000607020 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
SSBP4-214ENST00000607020 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
SSBP4-214ENST00000607020 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
SSBP4-214ENST00000607020 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-214ENST00000607020 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
SSBP4-214ENST00000607020 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
SSBP4-214ENST00000607020 NDUFA1O15239 70 aa8.88□□□□□ -0.99
SSBP4-214ENST00000607020 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
SSBP4-214ENST00000607020 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
SSBP4-214ENST00000607020 Q8IZM0 81 aa8.88□□□□□ -0.99
SSBP4-214ENST00000607020 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
SSBP4-214ENST00000607020 H3BRM9 83 aa8.87□□□□□ -0.99
SSBP4-214ENST00000607020 PRSS2P07478 247 aa8.87□□□□□ -0.99
SSBP4-214ENST00000607020 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
SSBP4-214ENST00000607020 TOMM7Q9P0U1 55 aa8.87□□□□□ -0.99
SSBP4-214ENST00000607020 ZNF22P17026 224 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-214ENST00000607020 UNQ6190/PRO20217Q6UXQ8 127 aa8.86□□□□□ -0.99
SSBP4-214ENST00000607020 HSPB8Q9UJY1 196 aa8.86□□□□□ -0.99
SSBP4-214ENST00000607020 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SSBP4-214ENST00000607020 C11orf86A6NJI1 115 aa8.85□□□□□ -0.99
SSBP4-214ENST00000607020 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SSBP4-214ENST00000607020 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
SSBP4-214ENST00000607020 C2orf82Q6UX34 121 aa8.85□□□□□ -0.99
SSBP4-214ENST00000607020 FAM19A5Q7Z5A7 132 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-214ENST00000607020 C6orf48Q9UBA6 75 aa8.85□□□□□ -0.99
SSBP4-214ENST00000607020 TRBV30A0A0K0K1B3 111 aa8.84□□□□□ -0.99
SSBP4-214ENST00000607020 ZNF861PO60384 105 aa8.84□□□□□ -0.99
SSBP4-214ENST00000607020 TSPAN13O95857 204 aa8.84□□□□□ -0.99
SSBP4-214ENST00000607020 FABP4P15090 132 aa8.84□□□□□ -0.99
SSBP4-214ENST00000607020 CKS1BP61024 79 aa8.84□□□□□ -0.99
SSBP4-214ENST00000607020 F8VRH5 84 aa8.83□□□□□ -1
SSBP4-214ENST00000607020 M0QXV9 152 aa8.83□□□□□ -1
SSBP4-214ENST00000607020 UBE2BP63146 152 aa8.83□□□□□ -1
SSBP4-214ENST00000607020 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
SSBP4-214ENST00000607020 COX7B2Q8TF08 81 aa8.83□□□□□ -1
SSBP4-214ENST00000607020 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
SSBP4-214ENST00000607020 H0Y8G0 127 aa8.82□□□□□ -1
SSBP4-214ENST00000607020 CXCL5P42830 114 aa8.82□□□□□ -1
SSBP4-214ENST00000607020 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
SSBP4-214ENST00000607020 GAGE2EQ4V326 116 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms