RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 FAIMQ9NVQ4 179 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 APLNQ9ULZ1 77 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 IER3IP1Q9Y5U9 82 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 NUP188Q5SRE5 1749 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 SETBP1Q9Y6X0 1596 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 PAPPA2Q9BXP8 1791 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 F6UZH7 168 aa-0.63□□□□□ -2.51
SNORA28-201ENST00000606769 RPL13AP3Q6NVV1 102 aa-0.63□□□□□ -2.51
SNORA28-201ENST00000606769 MANBALQ9NQG1 85 aa-0.63□□□□□ -2.51
SNORA28-201ENST00000606769 NKTRP30414 1462 aaKnown RBP-0.63□□□□□ -2.51
SNORA28-201ENST00000606769 CC2D2AQ9P2K1 1620 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 A0A0G2JMZ2 1700 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 SPHKAPQ2M3C7 1700 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 PZPP20742 1482 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 CPSF4LA6NMK7 179 aaKnown RBP-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 SNAPC5O75971 98 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 ATP5EP56381 51 aaPredicted RBP-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 KRTAP20-2Q3LI61 65 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 H1FX-AS1Q4G0G2 97 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 LINC00846Q9NV44 126 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 PRO1854Q9UHT4 67 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 PCLOQ9Y6V0 5065 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 TGP01266 2768 aa-0.64□□□□□ -2.51
SNORA28-201ENST00000606769 TCHHQ07283 1943 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 A0A087WVE0 104 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 A0A1B0GWA3 101 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 FAM24AA6NFZ4 105 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 CORTO00230 105 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 HSD52Q0P140 79 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 LELP1Q5T871 98 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 PRO1933Q9H354 126 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 CHD1O14646 1710 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 ARHGAP5Q13017 1502 aa-0.65□□□□□ -2.51
SNORA28-201ENST00000606769 NRKQ7Z2Y5 1582 aa-0.66□□□□□ -2.51
SNORA28-201ENST00000606769 NF1P21359 2839 aa-0.66□□□□□ -2.51
SNORA28-201ENST00000606769 hADV29S1A0JD25 119 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 LINC00587B1AMM8 73 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 SYS1-DBNDD2H3BUS1 97 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 COX6CP09669 75 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 COX8AP10176 69 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 USMG5Q96IX5 58 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 PKD1P98161 4303 aa-0.66□□□□□ -2.52
SNORA28-201ENST00000606769 TOPAZ1Q8N9V7 1692 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 A0A1B0GU69 56 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 NAP1L6A6NFF2 107 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 TRAPPC2P0DI81 140 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 TRAPPC2BP0DI82 140 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 SAA2P0DJI9 122 aaPredicted RBP-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 GNG4P50150 75 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 PPP3R1P63098 170 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 SEC11AP67812 179 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 DEFB135Q30KP9 77 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 ABCC5O15440 1437 aa-0.67□□□□□ -2.52
SNORA28-201ENST00000606769 FAT1Q14517 4588 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 CREBBPQ92793 2442 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 EFCAB10A6NFE3 127 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 H3BQ15 152 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 SNCAP37840 140 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 ASIPP42127 132 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 C6orf201Q7Z4U5 140 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 SVBPQ8N300 66 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 C12orf57Q99622 126 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 C2orf88Q9BSF0 95 aa-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 TARBP1Q13395 1621 aaKnown RBP-0.68□□□□□ -2.52
SNORA28-201ENST00000606769 EDC4Q6P2E9 1401 aaKnown RBP-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 C7orf77A4D0Y5 90 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 CRYM-AS1A6NIL9 109 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 S100A1P23297 94 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 REV3LO60673 3130 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 MAPKBP1O60336 1514 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 KNDC1Q76NI1 1749 aa-0.69□□□□□ -2.52
SNORA28-201ENST00000606769 NCOA3Q9Y6Q9 1424 aa-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 DEFB112Q30KQ8 113 aa-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 DEFB107AQ8IZN7 70 aa-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 DNAH6Q9C0G6 4158 aa-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 MXRA5Q9NR99 2828 aa-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 SONP18583 2426 aaKnown RBP-0.7□□□□□ -2.52
SNORA28-201ENST00000606769 STARD9Q9P2P6 4700 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 PDCD11Q14690 1871 aaKnown RBP-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 NRXN1Q9ULB1 1477 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 KIAA1551Q9HCM1 1747 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 A0A0G2JND7 137 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 C9orf62Q8N4C0 152 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 CGREF1Q99674 301 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 MRPL34Q9BQ48 92 aaKnown RBP-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 CACFD1Q9UGQ2 172 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 ADAMTS12P58397 1594 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 PTPN23Q9H3S7 1636 aa-0.71□□□□□ -2.52
SNORA28-201ENST00000606769 ABCA3Q99758 1704 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 CUX1P39880 1505 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 PRDM15P57071 1507 aaPredicted RBP-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 ZFYVE16Q7Z3T8 1539 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 TRBV25-1A0A075B6N4 114 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 TMEM262E9PQX1 116 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 H0Y9P7 68 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 H7BZZ5 65 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 MT4P47944 62 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 GNG8Q9UK08 70 aa-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 EIF4G3O43432 1585 aaKnown RBP-0.72□□□□□ -2.52
SNORA28-201ENST00000606769 SPTBN4Q9H254 2564 aa-0.72□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms