RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SPANXB1Q9NS25 103 aaPredicted RBP15.44■□□□□ 0.06
SYMPK-212ENST00000598896 DNAH10Q8IVF4 4471 aa15.44■□□□□ 0.06
SYMPK-212ENST00000598896 CKS1BP61024 79 aa15.44■□□□□ 0.06
SYMPK-212ENST00000598896 BATFQ16520 125 aa15.44■□□□□ 0.06
SYMPK-212ENST00000598896 TMEM238C9JI98 176 aa15.42■□□□□ 0.06
SYMPK-212ENST00000598896 M0R143 59 aa15.42■□□□□ 0.06
SYMPK-212ENST00000598896 SRSF9Q13242 221 aaKnown RBP eCLIP15.42■□□□□ 0.06
SYMPK-212ENST00000598896 TAL2Q16559 108 aa15.42■□□□□ 0.06
SYMPK-212ENST00000598896 KMT2AQ03164 3969 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 A0A0U1RRA0 63 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 GCSHP23434 173 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 CXCL5P42830 114 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 MEIG1Q5JSS6 88 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 SFTA2Q6UW10 78 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 DAND5Q8N907 189 aa15.41■□□□□ 0.06
SYMPK-212ENST00000598896 M0R2N4 97 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 TIMM17BO60830 172 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 C10orf25Q5T742 122 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 CEND1Q8N111 149 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 NTN5Q8WTR8 489 aaPredicted RBP15.4■□□□□ 0.06
SYMPK-212ENST00000598896 COX11Q9Y6N1 276 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 SMIM13P0DJ93 91 aa15.4■□□□□ 0.06
SYMPK-212ENST00000598896 GVQW2A0A096LPI5 108 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-212ENST00000598896 LY6G6CO95867 125 aa15.39■□□□□ 0.05
SYMPK-212ENST00000598896 FXYD2P54710 66 aa15.39■□□□□ 0.05
SYMPK-212ENST00000598896 UNQ6190/PRO20217Q6UXQ8 127 aa15.39■□□□□ 0.05
SYMPK-212ENST00000598896 LINC00476Q8WZB0 136 aa15.39■□□□□ 0.05
SYMPK-212ENST00000598896 USP17L23D6RBM5 183 aa15.38■□□□□ 0.05
SYMPK-212ENST00000598896 ZNF561-AS1K7EIQ3 104 aa15.38■□□□□ 0.05
SYMPK-212ENST00000598896 TM2D2Q9BX73 214 aa15.38■□□□□ 0.05
SYMPK-212ENST00000598896 SPANXDQ9BXN6 97 aa15.37■□□□□ 0.05
SYMPK-212ENST00000598896 SPANXCQ9NY87 97 aa15.37■□□□□ 0.05
SYMPK-212ENST00000598896 CIRBPQ14011 172 aaKnown RBP15.37■□□□□ 0.05
SYMPK-212ENST00000598896 LECT2O14960 151 aa15.36■□□□□ 0.05
SYMPK-212ENST00000598896 ERG28Q9UKR5 140 aa15.36■□□□□ 0.05
SYMPK-212ENST00000598896 EIF4EBP3O60516 100 aaPredicted RBP15.35■□□□□ 0.05
SYMPK-212ENST00000598896 PFN2P35080 140 aa15.35■□□□□ 0.05
SYMPK-212ENST00000598896 WFDC2Q14508 124 aa15.35■□□□□ 0.05
SYMPK-212ENST00000598896 C9orf116Q5BN46 136 aaPredicted RBP15.35■□□□□ 0.05
SYMPK-212ENST00000598896 Q6ZR54 194 aa15.35■□□□□ 0.05
SYMPK-212ENST00000598896 NPC2P61916 151 aa15.34■□□□□ 0.05
SYMPK-212ENST00000598896 Q6ZRN7 208 aaPredicted RBP15.34■□□□□ 0.05
SYMPK-212ENST00000598896 MUSTN1Q8IVN3 82 aa15.33■□□□□ 0.05
SYMPK-212ENST00000598896 PSCAO43653 123 aa15.33■□□□□ 0.04
SYMPK-212ENST00000598896 CAMK2N2Q96S95 79 aa15.33■□□□□ 0.04
SYMPK-212ENST00000598896 LINC00158P58513 81 aa15.32■□□□□ 0.04
SYMPK-212ENST00000598896 C6orf48Q9UBA6 75 aa15.32■□□□□ 0.04
SYMPK-212ENST00000598896 ALMS1Q8TCU4 4167 aa15.32■□□□□ 0.04
SYMPK-212ENST00000598896 Q6ZVH6 145 aa15.31■□□□□ 0.04
SYMPK-212ENST00000598896 MIR7-3HGQ8N6C7 128 aa15.31■□□□□ 0.04
SYMPK-212ENST00000598896 C2orf48Q96LS8 159 aa15.31■□□□□ 0.04
SYMPK-212ENST00000598896 PTTG1IPP53801 180 aa15.31■□□□□ 0.04
SYMPK-212ENST00000598896 Q6ZRU5 148 aa15.31■□□□□ 0.04
SYMPK-212ENST00000598896 SOSTDC1Q6X4U4 206 aa15.3■□□□□ 0.04
SYMPK-212ENST00000598896 SLPIP03973 132 aa15.29■□□□□ 0.04
SYMPK-212ENST00000598896 LINC00308Q8TCZ7 52 aa15.29■□□□□ 0.04
SYMPK-212ENST00000598896 COX17Q14061 63 aa15.27■□□□□ 0.03
SYMPK-212ENST00000598896 NHP2Q9NX24 153 aaKnown RBP15.27■□□□□ 0.03
SYMPK-212ENST00000598896 A4D1N5 150 aa15.26■□□□□ 0.03
SYMPK-212ENST00000598896 IFITM1P13164 125 aa15.26■□□□□ 0.03
SYMPK-212ENST00000598896 TRBV30A0A0K0K1B3 111 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 K7ERJ3 54 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 SYCNQ0VAF6 134 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 DNAH6Q9C0G6 4158 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 LRCOL1A6NCL2 159 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 RPL24P83731 157 aaKnown RBP15.25■□□□□ 0.03
SYMPK-212ENST00000598896 COL5A1-AS1Q5SY13 56 aa15.25■□□□□ 0.03
SYMPK-212ENST00000598896 DNAH2Q9P225 4427 aa15.24■□□□□ 0.03
SYMPK-212ENST00000598896 A6NDN8 102 aa15.24■□□□□ 0.03
SYMPK-212ENST00000598896 F8WDY8 70 aa15.24■□□□□ 0.03
SYMPK-212ENST00000598896 TMEM238LA0A1B0GVL6 79 aa15.23■□□□□ 0.03
SYMPK-212ENST00000598896 A6NJY4 79 aa15.23■□□□□ 0.03
SYMPK-212ENST00000598896 HYDINQ4G0P3 5121 aa15.23■□□□□ 0.03
SYMPK-212ENST00000598896 LBHQ53QV2 105 aaPredicted RBP15.22■□□□□ 0.03
SYMPK-212ENST00000598896 CARD19Q96LW7 228 aa15.22■□□□□ 0.03
SYMPK-212ENST00000598896 A0A1B0GWB2 263 aa15.2■□□□□ 0.02
SYMPK-212ENST00000598896 CFC1BP0CG36 223 aa15.2■□□□□ 0.02
SYMPK-212ENST00000598896 CFC1P0CG37 223 aa15.2■□□□□ 0.02
SYMPK-212ENST00000598896 SND1-IT1Q9HBX3 110 aa15.19■□□□□ 0.02
SYMPK-212ENST00000598896 C1orf134Q5TEV5 83 aa15.18■□□□□ 0.02
SYMPK-212ENST00000598896 PPDPFQ9H3Y8 114 aa15.18■□□□□ 0.02
SYMPK-212ENST00000598896 TAX1BP3O14907 124 aa15.17■□□□□ 0.02
SYMPK-212ENST00000598896 COPS9Q8WXC6 57 aa15.17■□□□□ 0.02
SYMPK-212ENST00000598896 RAB37Q96AX2 223 aa15.16■□□□□ 0.02
SYMPK-212ENST00000598896 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.15■□□□□ 0.02
SYMPK-212ENST00000598896 NDUFC2-KCTD14E9PQ53 114 aa15.15■□□□□ 0.02
SYMPK-212ENST00000598896 C14orf177Q52M58 125 aa15.15■□□□□ 0.02
SYMPK-212ENST00000598896 LOC107984156A0A0G2JMH3 177 aa15.14■□□□□ 0.01
SYMPK-212ENST00000598896 RNF151Q2KHN1 245 aa15.14■□□□□ 0.01
SYMPK-212ENST00000598896 ARL17AQ8IVW1 177 aa15.14■□□□□ 0.01
SYMPK-212ENST00000598896 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.14■□□□□ 0.01
SYMPK-212ENST00000598896 CNBPP62633 177 aaKnown RBP15.14■□□□□ 0.01
SYMPK-212ENST00000598896 Q6ZRP5 223 aa15.14■□□□□ 0.01
SYMPK-212ENST00000598896 A0A0B4J2C4 111 aa15.13■□□□□ 0.01
SYMPK-212ENST00000598896 XAGE1AQ9HD64 81 aa15.13■□□□□ 0.01
SYMPK-212ENST00000598896 A0A087WTM6 91 aa15.12■□□□□ 0.01
SYMPK-212ENST00000598896 Q8NDZ9 215 aa15.12■□□□□ 0.01
SYMPK-212ENST00000598896 Q8N814 137 aa15.1■□□□□ 0.01
SYMPK-212ENST00000598896 IGKV2-28A0A075B6P5 120 aa15.1■□□□□ 0.01
SYMPK-212ENST00000598896 IGKV2D-28P01615 120 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms