RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 SEC11AP67812 179 aa12.2□□□□□ -0.46
ARHGEF1-217ENST00000598812 TIMM17AQ99595 171 aa12.2□□□□□ -0.46
ARHGEF1-217ENST00000598812 TNXBP22105 4242 aa12.19□□□□□ -0.46
ARHGEF1-217ENST00000598812 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
ARHGEF1-217ENST00000598812 LINC01546A6NGU7 62 aa12.19□□□□□ -0.46
ARHGEF1-217ENST00000598812 FAM19A3Q7Z5A8 133 aa12.19□□□□□ -0.46
ARHGEF1-217ENST00000598812 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
ARHGEF1-217ENST00000598812 HERVK_113P63121 156 aa12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 ERASQ7Z444 233 aa12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 GEMIN7Q9H840 131 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 RNF213Q63HN8 5207 aa12.18□□□□□ -0.46
ARHGEF1-217ENST00000598812 NDUFC2-KCTD14E9PQ53 114 aa12.17□□□□□ -0.46
ARHGEF1-217ENST00000598812 CKS1BP61024 79 aa12.17□□□□□ -0.46
ARHGEF1-217ENST00000598812 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
ARHGEF1-217ENST00000598812 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
ARHGEF1-217ENST00000598812 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
ARHGEF1-217ENST00000598812 Q8IZM0 81 aa12.15□□□□□ -0.46
ARHGEF1-217ENST00000598812 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
ARHGEF1-217ENST00000598812 LINC01549A6NIU2 74 aa12.14□□□□□ -0.47
ARHGEF1-217ENST00000598812 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
ARHGEF1-217ENST00000598812 LINC00614P0C842 121 aa12.13□□□□□ -0.47
ARHGEF1-217ENST00000598812 M0QXV9 152 aa12.12□□□□□ -0.47
ARHGEF1-217ENST00000598812 PMCHL1Q16048 86 aa12.12□□□□□ -0.47
ARHGEF1-217ENST00000598812 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
ARHGEF1-217ENST00000598812 LRP2P98164 4655 aa12.11□□□□□ -0.47
ARHGEF1-217ENST00000598812 UBE2BP63146 152 aa12.11□□□□□ -0.47
ARHGEF1-217ENST00000598812 IGLV7-43P04211 117 aa12.1□□□□□ -0.47
ARHGEF1-217ENST00000598812 KRTAP10-8P60410 259 aa12.1□□□□□ -0.47
ARHGEF1-217ENST00000598812 C9orf129Q5T035 196 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-217ENST00000598812 A0A096LNJ9 63 aa12.09□□□□□ -0.47
ARHGEF1-217ENST00000598812 F8VRH5 84 aa12.09□□□□□ -0.47
ARHGEF1-217ENST00000598812 KRTAP7-1Q8IUC3 87 aa12.09□□□□□ -0.47
ARHGEF1-217ENST00000598812 CST9LQ9H4G1 147 aa12.09□□□□□ -0.47
ARHGEF1-217ENST00000598812 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 CXCL5P42830 114 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 NDUFA6P56556 154 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 RAB5BP61020 215 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
ARHGEF1-217ENST00000598812 PMVKQ15126 192 aa12.07□□□□□ -0.48
ARHGEF1-217ENST00000598812 SMIM1B2RUZ4 78 aa12.06□□□□□ -0.48
ARHGEF1-217ENST00000598812 HBDP02042 147 aa12.06□□□□□ -0.48
ARHGEF1-217ENST00000598812 ODF1Q14990 250 aa12.06□□□□□ -0.48
ARHGEF1-217ENST00000598812 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
ARHGEF1-217ENST00000598812 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
ARHGEF1-217ENST00000598812 XAGE1AQ9HD64 81 aa12.05□□□□□ -0.48
ARHGEF1-217ENST00000598812 TRGC2P03986 189 aa12.04□□□□□ -0.48
ARHGEF1-217ENST00000598812 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
ARHGEF1-217ENST00000598812 H0Y9J4 135 aa12.02□□□□□ -0.49
ARHGEF1-217ENST00000598812 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
ARHGEF1-217ENST00000598812 C22orf24Q9Y442 160 aa12.01□□□□□ -0.49
ARHGEF1-217ENST00000598812 H3BRM9 83 aa12□□□□□ -0.49
ARHGEF1-217ENST00000598812 ATP5LO75964 103 aa12□□□□□ -0.49
ARHGEF1-217ENST00000598812 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
ARHGEF1-217ENST00000598812 BAGE3Q86Y29 109 aa12□□□□□ -0.49
ARHGEF1-217ENST00000598812 CHCHD1Q96BP2 118 aaKnown RBP12□□□□□ -0.49
ARHGEF1-217ENST00000598812 COLCA2A8K830 154 aa11.98□□□□□ -0.49
ARHGEF1-217ENST00000598812 SCO1O75880 301 aa11.97□□□□□ -0.49
ARHGEF1-217ENST00000598812 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
ARHGEF1-217ENST00000598812 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.49
ARHGEF1-217ENST00000598812 PRR26Q8N8Z3 221 aa11.96□□□□□ -0.49
ARHGEF1-217ENST00000598812 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.49
ARHGEF1-217ENST00000598812 NUPR1O60356 82 aa11.95□□□□□ -0.5
ARHGEF1-217ENST00000598812 HSBP1O75506 76 aa11.95□□□□□ -0.5
ARHGEF1-217ENST00000598812 MRPL55Q7Z7F7 128 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-217ENST00000598812 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
ARHGEF1-217ENST00000598812 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-217ENST00000598812 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-217ENST00000598812 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
ARHGEF1-217ENST00000598812 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
ARHGEF1-217ENST00000598812 ZNF861PO60384 105 aa11.92□□□□□ -0.5
ARHGEF1-217ENST00000598812 SERF1AO75920 110 aa11.92□□□□□ -0.5
ARHGEF1-217ENST00000598812 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
ARHGEF1-217ENST00000598812 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
ARHGEF1-217ENST00000598812 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.5
ARHGEF1-217ENST00000598812 LINC00310P59036 64 aa11.89□□□□□ -0.51
ARHGEF1-217ENST00000598812 H0Y8G0 127 aa11.88□□□□□ -0.51
ARHGEF1-217ENST00000598812 PFN2P35080 140 aa11.88□□□□□ -0.51
ARHGEF1-217ENST00000598812 NKAPP1Q8N9T2 125 aa11.88□□□□□ -0.51
ARHGEF1-217ENST00000598812 LINC00167Q96N53 147 aa11.88□□□□□ -0.51
ARHGEF1-217ENST00000598812 GAGE10A6NGK3 116 aa11.87□□□□□ -0.51
ARHGEF1-217ENST00000598812 RPL37AP8A6NKH3 93 aa11.87□□□□□ -0.51
ARHGEF1-217ENST00000598812 BCE1O60756 84 aa11.87□□□□□ -0.51
ARHGEF1-217ENST00000598812 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-217ENST00000598812 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-217ENST00000598812 IGLV5-37A0A075B6J1 123 aa11.86□□□□□ -0.51
ARHGEF1-217ENST00000598812 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
ARHGEF1-217ENST00000598812 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
ARHGEF1-217ENST00000598812 FABP4P15090 132 aa11.85□□□□□ -0.51
ARHGEF1-217ENST00000598812 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
ARHGEF1-217ENST00000598812 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
ARHGEF1-217ENST00000598812 COX17Q14061 63 aa11.82□□□□□ -0.52
ARHGEF1-217ENST00000598812 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-217ENST00000598812 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
ARHGEF1-217ENST00000598812 SND1-IT1Q9HBX3 110 aa11.81□□□□□ -0.52
ARHGEF1-217ENST00000598812 HSPB8Q9UJY1 196 aa11.8□□□□□ -0.52
ARHGEF1-217ENST00000598812 IGKV2-28A0A075B6P5 120 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms