RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TYMSOSQ8TAI1 123 aa6.25□□□□□ -1.41
CHMP2A-202ENST00000596708 F8VRH5 84 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 CRYGAP11844 174 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 HERVK_113P63121 156 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 SEC11AP67812 179 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 GEMIN7Q9H840 131 aaKnown RBP6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 CDKN2A-AS1Q9UH64 79 aa6.24□□□□□ -1.41
CHMP2A-202ENST00000596708 A0A087X002 238 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 IGIPA6NJ69 53 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 BCE1O60756 84 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 NPSP0C0P6 89 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
CHMP2A-202ENST00000596708 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
CHMP2A-202ENST00000596708 K7EMI3 77 aa6.22□□□□□ -1.41
CHMP2A-202ENST00000596708 CXCL5P42830 114 aa6.22□□□□□ -1.41
CHMP2A-202ENST00000596708 LINC00167Q96N53 147 aa6.22□□□□□ -1.41
CHMP2A-202ENST00000596708 MUC2Q02817 5179 aa6.22□□□□□ -1.41
CHMP2A-202ENST00000596708 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
CHMP2A-202ENST00000596708 G0S2P27469 103 aa6.21□□□□□ -1.42
CHMP2A-202ENST00000596708 ANAPC16Q96DE5 110 aa6.21□□□□□ -1.42
CHMP2A-202ENST00000596708 NXT2Q9NPJ8 142 aaKnown RBP6.21□□□□□ -1.42
CHMP2A-202ENST00000596708 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
CHMP2A-202ENST00000596708 MT-ND4LP03901 98 aa6.2□□□□□ -1.42
CHMP2A-202ENST00000596708 UBE2AP49459 152 aa6.2□□□□□ -1.42
CHMP2A-202ENST00000596708 RAB5BP61020 215 aa6.2□□□□□ -1.42
CHMP2A-202ENST00000596708 COX7B2Q8TF08 81 aa6.2□□□□□ -1.42
CHMP2A-202ENST00000596708 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
CHMP2A-202ENST00000596708 PNRC1Q12796 327 aaPredicted RBP6.19□□□□□ -1.42
CHMP2A-202ENST00000596708 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
CHMP2A-202ENST00000596708 NKAPP1Q8N9T2 125 aa6.19□□□□□ -1.42
CHMP2A-202ENST00000596708 TOMM6Q96B49 74 aa6.19□□□□□ -1.42
CHMP2A-202ENST00000596708 A0A1B0GVG6 124 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 SCGB3A1Q96QR1 104 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
CHMP2A-202ENST00000596708 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
CHMP2A-202ENST00000596708 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
CHMP2A-202ENST00000596708 ERASQ7Z444 233 aa6.17□□□□□ -1.42
CHMP2A-202ENST00000596708 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
CHMP2A-202ENST00000596708 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
CHMP2A-202ENST00000596708 SPINK8P0C7L1 97 aa6.16□□□□□ -1.42
CHMP2A-202ENST00000596708 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
CHMP2A-202ENST00000596708 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
CHMP2A-202ENST00000596708 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.42
CHMP2A-202ENST00000596708 ADCYAP1P18509 176 aa6.15□□□□□ -1.42
CHMP2A-202ENST00000596708 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
CHMP2A-202ENST00000596708 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
CHMP2A-202ENST00000596708 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
CHMP2A-202ENST00000596708 SCO1O75880 301 aa6.14□□□□□ -1.43
CHMP2A-202ENST00000596708 FAM229BQ4G0N7 80 aa6.14□□□□□ -1.43
CHMP2A-202ENST00000596708 KRTAP13-1Q8IUC0 172 aa6.14□□□□□ -1.43
CHMP2A-202ENST00000596708 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 ATP5LO75964 103 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 PFN2P35080 140 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 PRLHP81277 87 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 MRPL18Q9H0U6 180 aaKnown RBP6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
CHMP2A-202ENST00000596708 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
CHMP2A-202ENST00000596708 H3BRM9 83 aa6.12□□□□□ -1.43
CHMP2A-202ENST00000596708 RAB14P61106 215 aa6.12□□□□□ -1.43
CHMP2A-202ENST00000596708 PMVKQ15126 192 aa6.12□□□□□ -1.43
CHMP2A-202ENST00000596708 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
CHMP2A-202ENST00000596708 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
CHMP2A-202ENST00000596708 RPL24P83731 157 aaKnown RBP6.1□□□□□ -1.43
CHMP2A-202ENST00000596708 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
CHMP2A-202ENST00000596708 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
CHMP2A-202ENST00000596708 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
CHMP2A-202ENST00000596708 VPREB1P12018 145 aa6.09□□□□□ -1.43
CHMP2A-202ENST00000596708 NDUFA6P56556 154 aa6.09□□□□□ -1.43
CHMP2A-202ENST00000596708 FA2HQ7L5A8 372 aa6.09□□□□□ -1.43
CHMP2A-202ENST00000596708 CBLN2Q8IUK8 224 aa6.09□□□□□ -1.43
CHMP2A-202ENST00000596708 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
CHMP2A-202ENST00000596708 TRAV9-1A0A075B6T8 112 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 LINC01546A6NGU7 62 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 CTAG1AP78358 180 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 C3orf22Q8N5N4 141 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 PPDPFQ9H3Y8 114 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 ERG28Q9UKR5 140 aa6.08□□□□□ -1.44
CHMP2A-202ENST00000596708 M0R378 163 aa6.07□□□□□ -1.44
CHMP2A-202ENST00000596708 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
CHMP2A-202ENST00000596708 S100PP25815 95 aa6.07□□□□□ -1.44
CHMP2A-202ENST00000596708 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
CHMP2A-202ENST00000596708 GNB1LQ9BYB4 327 aa6.07□□□□□ -1.44
CHMP2A-202ENST00000596708 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
CHMP2A-202ENST00000596708 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
CHMP2A-202ENST00000596708 FABP9Q0Z7S8 132 aa6.06□□□□□ -1.44
CHMP2A-202ENST00000596708 COX17Q14061 63 aa6.06□□□□□ -1.44
CHMP2A-202ENST00000596708 C4orf48Q5BLP8 95 aa6.06□□□□□ -1.44
CHMP2A-202ENST00000596708 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
CHMP2A-202ENST00000596708 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CHMP2A-202ENST00000596708 COX19Q49B96 90 aa6.04□□□□□ -1.44
CHMP2A-202ENST00000596708 LINC00337Q8N6G1 96 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms