RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 A0A1B0GX51 115 aa12.13□□□□□ -0.47
ARHGEF1-213ENST00000595897 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
ARHGEF1-213ENST00000595897 OBSCN-AS1Q96MR7 158 aa12.13□□□□□ -0.47
ARHGEF1-213ENST00000595897 HIST1H4AP62805 103 aaKnown RBP12.13□□□□□ -0.47
ARHGEF1-213ENST00000595897 A0A087WVE0 104 aa12.12□□□□□ -0.47
ARHGEF1-213ENST00000595897 Q6JHZ5 121 aa12.12□□□□□ -0.47
ARHGEF1-213ENST00000595897 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
ARHGEF1-213ENST00000595897 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
ARHGEF1-213ENST00000595897 PRB1P04280 392 aa12.12□□□□□ -0.47
ARHGEF1-213ENST00000595897 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
ARHGEF1-213ENST00000595897 SS18Q15532 418 aa12.11□□□□□ -0.47
ARHGEF1-213ENST00000595897 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
ARHGEF1-213ENST00000595897 CSNK1G2-AS1Q8NCQ2 148 aa12.1□□□□□ -0.47
ARHGEF1-213ENST00000595897 CRYGAP11844 174 aa12.09□□□□□ -0.47
ARHGEF1-213ENST00000595897 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-213ENST00000595897 LOC107984640A0A0U1RRK4 108 aa12.08□□□□□ -0.48
ARHGEF1-213ENST00000595897 GYPEP15421 78 aa12.08□□□□□ -0.48
ARHGEF1-213ENST00000595897 LY6G6DO95868 133 aa12.08□□□□□ -0.48
ARHGEF1-213ENST00000595897 A0A096LPF7 62 aa12.07□□□□□ -0.48
ARHGEF1-213ENST00000595897 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
ARHGEF1-213ENST00000595897 C19orf73Q9NVV2 129 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 ITPR3Q14573 2671 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 NBPF19A0A087WUL8 3843 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 Q8IZM0 81 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 IGLV1-51P01701 117 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 CCKP06307 115 aa12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 RNASE1P07998 156 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-213ENST00000595897 MTORP42345 2549 aa12.05□□□□□ -0.48
ARHGEF1-213ENST00000595897 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
ARHGEF1-213ENST00000595897 SERP2Q8N6R1 65 aa12.05□□□□□ -0.48
ARHGEF1-213ENST00000595897 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
ARHGEF1-213ENST00000595897 ZNF469Q96JG9 3925 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-213ENST00000595897 J3KT08 172 aa12.04□□□□□ -0.48
ARHGEF1-213ENST00000595897 JMJD7-PLA2G4BH0Y9G9 81 aa12.03□□□□□ -0.48
ARHGEF1-213ENST00000595897 Q8N814 137 aa12.03□□□□□ -0.48
ARHGEF1-213ENST00000595897 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
ARHGEF1-213ENST00000595897 CYSTM1Q9H1C7 97 aa12.03□□□□□ -0.48
ARHGEF1-213ENST00000595897 TMEM256-PLSCR3K7ERE1 68 aa12.02□□□□□ -0.49
ARHGEF1-213ENST00000595897 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.49
ARHGEF1-213ENST00000595897 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
ARHGEF1-213ENST00000595897 S100A7L2Q5SY68 101 aa12.01□□□□□ -0.49
ARHGEF1-213ENST00000595897 NANOS2P60321 138 aaKnown RBP12□□□□□ -0.49
ARHGEF1-213ENST00000595897 NBEAL2Q6ZNJ1 2754 aa12□□□□□ -0.49
ARHGEF1-213ENST00000595897 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
ARHGEF1-213ENST00000595897 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
ARHGEF1-213ENST00000595897 GCN1Q92616 2671 aaKnown RBP12□□□□□ -0.49
ARHGEF1-213ENST00000595897 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
ARHGEF1-213ENST00000595897 WFDC9Q8NEX5 89 aa12□□□□□ -0.49
ARHGEF1-213ENST00000595897 APCP25054 2843 aa11.99□□□□□ -0.49
ARHGEF1-213ENST00000595897 ACANP16112 2415 aa11.99□□□□□ -0.49
ARHGEF1-213ENST00000595897 C9orf116Q5BN46 136 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF1-213ENST00000595897 KRTAP1-3Q8IUG1 177 aa11.98□□□□□ -0.49
ARHGEF1-213ENST00000595897 BBC3Q96PG8 261 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF1-213ENST00000595897 HILS1P60008 231 aa11.98□□□□□ -0.49
ARHGEF1-213ENST00000595897 KIR2DL5BQ8NHK3 375 aa11.98□□□□□ -0.49
ARHGEF1-213ENST00000595897 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
ARHGEF1-213ENST00000595897 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
ARHGEF1-213ENST00000595897 PRO0255Q9UI72 69 aa11.97□□□□□ -0.49
ARHGEF1-213ENST00000595897 NDUFC2O95298 119 aa11.96□□□□□ -0.49
ARHGEF1-213ENST00000595897 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.5
ARHGEF1-213ENST00000595897 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.5
ARHGEF1-213ENST00000595897 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.5
ARHGEF1-213ENST00000595897 CHCHD10Q8WYQ3 142 aaPredicted RBP11.96□□□□□ -0.5
ARHGEF1-213ENST00000595897 UBL5Q9BZL1 73 aa11.96□□□□□ -0.5
ARHGEF1-213ENST00000595897 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
ARHGEF1-213ENST00000595897 TMEM258P61165 79 aa11.95□□□□□ -0.5
ARHGEF1-213ENST00000595897 COX17Q14061 63 aa11.95□□□□□ -0.5
ARHGEF1-213ENST00000595897 ENHOQ6UWT2 76 aa11.95□□□□□ -0.5
ARHGEF1-213ENST00000595897 UBR5O95071 2799 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF1-213ENST00000595897 KIAA0087Q14695 138 aa11.94□□□□□ -0.5
ARHGEF1-213ENST00000595897 ATP5EP2Q5VTU8 51 aa11.94□□□□□ -0.5
ARHGEF1-213ENST00000595897 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
ARHGEF1-213ENST00000595897 FAM19A1Q7Z5A9 133 aa11.94□□□□□ -0.5
ARHGEF1-213ENST00000595897 GHRHP01286 108 aa11.93□□□□□ -0.5
ARHGEF1-213ENST00000595897 Q8N3U1 123 aa11.92□□□□□ -0.5
ARHGEF1-213ENST00000595897 RPS28P62857 69 aaKnown RBP11.92□□□□□ -0.5
ARHGEF1-213ENST00000595897 REG3AQ06141 175 aa11.92□□□□□ -0.5
ARHGEF1-213ENST00000595897 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
ARHGEF1-213ENST00000595897 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
ARHGEF1-213ENST00000595897 LAMTOR3Q9UHA4 124 aa11.91□□□□□ -0.5
ARHGEF1-213ENST00000595897 DSCR8Q96T75 97 aa11.9□□□□□ -0.5
ARHGEF1-213ENST00000595897 RBM3P98179 157 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-213ENST00000595897 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
ARHGEF1-213ENST00000595897 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
ARHGEF1-213ENST00000595897 Q8NDZ9 215 aa11.89□□□□□ -0.51
ARHGEF1-213ENST00000595897 DEFB4AO15263 64 aa11.89□□□□□ -0.51
ARHGEF1-213ENST00000595897 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
ARHGEF1-213ENST00000595897 X6R8D5 127 aa11.88□□□□□ -0.51
ARHGEF1-213ENST00000595897 IGHV4-28A0A0C4DH34 117 aa11.88□□□□□ -0.51
ARHGEF1-213ENST00000595897 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
ARHGEF1-213ENST00000595897 C6orf223Q8N319 242 aa11.86□□□□□ -0.51
ARHGEF1-213ENST00000595897 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
ARHGEF1-213ENST00000595897 C10orf25Q5T742 122 aa11.85□□□□□ -0.51
ARHGEF1-213ENST00000595897 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
ARHGEF1-213ENST00000595897 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
ARHGEF1-213ENST00000595897 ZNF561-AS1K7EIQ3 104 aa11.85□□□□□ -0.51
ARHGEF1-213ENST00000595897 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
ARHGEF1-213ENST00000595897 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
ARHGEF1-213ENST00000595897 Q6ZQT0 140 aa11.84□□□□□ -0.51
ARHGEF1-213ENST00000595897 HAMPP81172 84 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms