RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 GAGE2DQ9UEU5 116 aa4.96□□□□□ -1.62
SMG9-202ENST00000594081 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 APOC3P02656 99 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 G0S2P27469 103 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 IFI27P40305 119 aaPredicted RBP4.95□□□□□ -1.62
SMG9-202ENST00000594081 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
SMG9-202ENST00000594081 ORMDL2Q53FV1 153 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 Q6ZUT4 128 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 Q8N8P6 123 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
SMG9-202ENST00000594081 GHRHP01286 108 aa4.94□□□□□ -1.62
SMG9-202ENST00000594081 CRYGAP11844 174 aa4.94□□□□□ -1.62
SMG9-202ENST00000594081 MRPS36P82909 103 aaKnown RBP4.94□□□□□ -1.62
SMG9-202ENST00000594081 Q6ZN92 141 aa4.94□□□□□ -1.62
SMG9-202ENST00000594081 MRPL18Q9H0U6 180 aaKnown RBP4.94□□□□□ -1.62
SMG9-202ENST00000594081 CYSLTR1Q9Y271 337 aa4.94□□□□□ -1.62
SMG9-202ENST00000594081 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 LINC01549A6NIU2 74 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 F8WDY8 70 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 NPSP0C0P6 89 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 RPL39P62891 51 aaKnown RBP4.93□□□□□ -1.62
SMG9-202ENST00000594081 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 C2orf88Q9BSF0 95 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 PYGO1Q9Y3Y4 419 aa4.93□□□□□ -1.62
SMG9-202ENST00000594081 LOC389332A0A1B0GUA5 103 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 NUPR1O60356 82 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 PAPPA-AS1Q5QFB9 102 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
SMG9-202ENST00000594081 LINC00173Q6ZV60 143 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 TMEM141Q96I45 108 aa4.92□□□□□ -1.62
SMG9-202ENST00000594081 TGIF2-C20orf24A0A0A6YYL0 155 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 KRTAP13-2Q52LG2 175 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 SMCO4Q9NRQ5 59 aa4.91□□□□□ -1.62
SMG9-202ENST00000594081 IGLV4-3A0A075B6K6 122 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 RPL28P46779 137 aaKnown RBP4.9□□□□□ -1.63
SMG9-202ENST00000594081 FABP9Q0Z7S8 132 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 KIAA1644Q3SXP7 199 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 FA2HQ7L5A8 372 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 TIMM17AQ99595 171 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 ALKBH7Q9BT30 221 aaPredicted RBP4.9□□□□□ -1.63
SMG9-202ENST00000594081 ANAPC11Q9NYG5 84 aa4.9□□□□□ -1.63
SMG9-202ENST00000594081 TRBV30A0A0K0K1B3 111 aa4.89□□□□□ -1.63
SMG9-202ENST00000594081 NDUFC2-KCTD14E9PQ53 114 aa4.89□□□□□ -1.63
SMG9-202ENST00000594081 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
SMG9-202ENST00000594081 PPDPFQ9H3Y8 114 aa4.89□□□□□ -1.63
SMG9-202ENST00000594081 TRAPPC1Q9Y5R8 145 aa4.89□□□□□ -1.63
SMG9-202ENST00000594081 SEC11AP67812 179 aa4.88□□□□□ -1.63
SMG9-202ENST00000594081 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
SMG9-202ENST00000594081 TOMM6Q96B49 74 aa4.88□□□□□ -1.63
SMG9-202ENST00000594081 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
SMG9-202ENST00000594081 VCX2Q9H322 139 aa4.88□□□□□ -1.63
SMG9-202ENST00000594081 LINC01546A6NGU7 62 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 IGIPA6NJ69 53 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 BCE1O60756 84 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 RAB5BP61020 215 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 KIAA0087Q14695 138 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 ASB16-AS1Q495Z4 193 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 LINC00242Q5T6M2 205 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 ERASQ7Z444 233 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
SMG9-202ENST00000594081 HERVK_113P63121 156 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 LBHQ53QV2 105 aaPredicted RBP4.86□□□□□ -1.63
SMG9-202ENST00000594081 LINC01561Q8N1V8 128 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 LINC00469Q8N7U9 141 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 C18orf32Q8TCD1 76 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 FAM104AQ969W3 186 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 PACRGQ96M98 296 aaPredicted RBP4.86□□□□□ -1.63
SMG9-202ENST00000594081 SCGB3A1Q96QR1 104 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 AMELXQ99217 191 aa4.86□□□□□ -1.63
SMG9-202ENST00000594081 HBDP02042 147 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 FAM19A3Q7Z5A8 133 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 MRPL55Q7Z7F7 128 aaKnown RBP4.85□□□□□ -1.63
SMG9-202ENST00000594081 CBLN2Q8IUK8 224 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
SMG9-202ENST00000594081 GEMIN7Q9H840 131 aaKnown RBP4.85□□□□□ -1.63
SMG9-202ENST00000594081 LINC00614P0C842 121 aa4.84□□□□□ -1.63
SMG9-202ENST00000594081 CTAG1AP78358 180 aa4.84□□□□□ -1.63
SMG9-202ENST00000594081 XAGE1AQ9HD64 81 aa4.84□□□□□ -1.63
SMG9-202ENST00000594081 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.63
SMG9-202ENST00000594081 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 ATP5LO75964 103 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 PRSS2P07478 247 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 PMVKQ15126 192 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 KRTAP13-1Q8IUC0 172 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
SMG9-202ENST00000594081 CHCHD1Q96BP2 118 aaKnown RBP4.83□□□□□ -1.64
SMG9-202ENST00000594081 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
SMG9-202ENST00000594081 CXCL5P42830 114 aa4.82□□□□□ -1.64
SMG9-202ENST00000594081 UBE2AP49459 152 aa4.82□□□□□ -1.64
SMG9-202ENST00000594081 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms