RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257		A4D1N5	150 aa		11.32	□□□□□ -0.6
TRMT1-223	ENST00000593257	IBA57-AS1	B1ANH7	110 aa		11.32	□□□□□ -0.6
TRMT1-223	ENST00000593257	CKS1B	P61024	79 aa		11.32	□□□□□ -0.6
TRMT1-223	ENST00000593257	VAMP3	Q15836	100 aa		11.31	□□□□□ -0.6
TRMT1-223	ENST00000593257		A0A0B4J2C4	111 aa		11.3	□□□□□ -0.6
TRMT1-223	ENST00000593257	NUPR2	A6NF83	97 aa		11.3	□□□□□ -0.6
TRMT1-223	ENST00000593257		H3BUT2	72 aa		11.3	□□□□□ -0.6
TRMT1-223	ENST00000593257	C1orf43	Q9BWL3	253 aa		11.3	□□□□□ -0.6
TRMT1-223	ENST00000593257	CFC1B	P0CG36	223 aa		11.29	□□□□□ -0.6
TRMT1-223	ENST00000593257	CFC1	P0CG37	223 aa		11.29	□□□□□ -0.6
TRMT1-223	ENST00000593257	KIAA0087	Q14695	138 aa		11.29	□□□□□ -0.6
TRMT1-223	ENST00000593257	SPAG11B	Q08648	103 aa		11.28	□□□□□ -0.6
TRMT1-223	ENST00000593257	LINC00308	Q8TCZ7	52 aa		11.28	□□□□□ -0.6
TRMT1-223	ENST00000593257	PRO1854	Q9UHT4	67 aa		11.28	□□□□□ -0.6
TRMT1-223	ENST00000593257	ERG28	Q9UKR5	140 aa		11.28	□□□□□ -0.6
TRMT1-223	ENST00000593257		A0A1W2PPM0	123 aa		11.27	□□□□□ -0.61
TRMT1-223	ENST00000593257	LINC00158	P58513	81 aa		11.27	□□□□□ -0.61
TRMT1-223	ENST00000593257	KRTAP26-1	Q6PEX3	210 aa		11.27	□□□□□ -0.61
TRMT1-223	ENST00000593257	RMI2	Q96E14	147 aa		11.27	□□□□□ -0.61
TRMT1-223	ENST00000593257	APLN	Q9ULZ1	77 aa		11.27	□□□□□ -0.61
TRMT1-223	ENST00000593257		A0A0U1RRA0	63 aa		11.26	□□□□□ -0.61
TRMT1-223	ENST00000593257	FABP2	P12104	132 aa		11.26	□□□□□ -0.61
TRMT1-223	ENST00000593257	DAND5	Q8N907	189 aa		11.26	□□□□□ -0.61
TRMT1-223	ENST00000593257	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.26	□□□□□ -0.61
TRMT1-223	ENST00000593257	COX17	Q14061	63 aa		11.25	□□□□□ -0.61
TRMT1-223	ENST00000593257	PGPEP1	Q9NXJ5	209 aa		11.25	□□□□□ -0.61
TRMT1-223	ENST00000593257	IGKV2D-24	A0A075B6R9	120 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257	NPC2	P61916	151 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257	C2orf82	Q6UX34	121 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257	GTF2H5	Q6ZYL4	71 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257	MIR7-3HG	Q8N6C7	128 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257	MUC7	Q8TAX7	377 aa		11.24	□□□□□ -0.61
TRMT1-223	ENST00000593257		F8WDY8	70 aa		11.23	□□□□□ -0.61
TRMT1-223	ENST00000593257	UBE2V1	Q13404	147 aa		11.23	□□□□□ -0.61
TRMT1-223	ENST00000593257	LYRM7	Q5U5X0	104 aa		11.23	□□□□□ -0.61
TRMT1-223	ENST00000593257	UBE2DNL	Q8IWF7	75 aa		11.23	□□□□□ -0.61
TRMT1-223	ENST00000593257	NAA38	Q9BRA0	125 aa	Known RBP	11.23	□□□□□ -0.61
TRMT1-223	ENST00000593257	TSPAN13	O95857	204 aa		11.22	□□□□□ -0.61
TRMT1-223	ENST00000593257	PFN2	P35080	140 aa		11.22	□□□□□ -0.61
TRMT1-223	ENST00000593257	GAGE10	A6NGK3	116 aa		11.21	□□□□□ -0.61
TRMT1-223	ENST00000593257	SOSTDC1	Q6X4U4	206 aa		11.21	□□□□□ -0.61
TRMT1-223	ENST00000593257	NTN5	Q8WTR8	489 aa	Predicted RBP	11.21	□□□□□ -0.61
TRMT1-223	ENST00000593257		Q9HAA7	133 aa		11.21	□□□□□ -0.61
TRMT1-223	ENST00000593257	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.2	□□□□□ -0.62
TRMT1-223	ENST00000593257	ZNF561-AS1	K7EIQ3	104 aa		11.2	□□□□□ -0.62
TRMT1-223	ENST00000593257		K7EP34	96 aa		11.2	□□□□□ -0.62
TRMT1-223	ENST00000593257	SPCS1	Q9Y6A9	102 aa		11.2	□□□□□ -0.62
TRMT1-223	ENST00000593257	EIF4EBP3	O60516	100 aa	Predicted RBP	11.19	□□□□□ -0.62
TRMT1-223	ENST00000593257	C2orf48	Q96LS8	159 aa		11.19	□□□□□ -0.62
TRMT1-223	ENST00000593257	LOC107984156	A0A0G2JMH3	177 aa		11.17	□□□□□ -0.62
TRMT1-223	ENST00000593257	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.17	□□□□□ -0.62
TRMT1-223	ENST00000593257	ARL17A	Q8IVW1	177 aa		11.17	□□□□□ -0.62
TRMT1-223	ENST00000593257	C6orf223	Q8N319	242 aa		11.17	□□□□□ -0.62
TRMT1-223	ENST00000593257	SND1-IT1	Q9HBX3	110 aa		11.17	□□□□□ -0.62
TRMT1-223	ENST00000593257	TRBV30	A0A0K0K1B3	111 aa		11.16	□□□□□ -0.62
TRMT1-223	ENST00000593257		Q1RN00	199 aa		11.16	□□□□□ -0.62
TRMT1-223	ENST00000593257	C15orf56	Q8N910	161 aa		11.16	□□□□□ -0.62
TRMT1-223	ENST00000593257	CAMK2N2	Q96S95	79 aa		11.16	□□□□□ -0.62
TRMT1-223	ENST00000593257	TRAV13-2	A0A0B4J235	113 aa		11.15	□□□□□ -0.62
TRMT1-223	ENST00000593257	RPL13A	P40429	203 aa	Known RBP	11.15	□□□□□ -0.62
TRMT1-223	ENST00000593257	PSMB2	P49721	201 aa		11.15	□□□□□ -0.62
TRMT1-223	ENST00000593257	HIGD2B	Q4VC39	106 aa		11.15	□□□□□ -0.62
TRMT1-223	ENST00000593257	DNAH9	Q9NYC9	4486 aa		11.15	□□□□□ -0.62
TRMT1-223	ENST00000593257		H7C2G1	150 aa		11.14	□□□□□ -0.63
TRMT1-223	ENST00000593257	C10orf25	Q5T742	122 aa		11.14	□□□□□ -0.63
TRMT1-223	ENST00000593257	LINC00526	Q96FQ7	95 aa		11.13	□□□□□ -0.63
TRMT1-223	ENST00000593257	SCGB1C2	P0DMR2	95 aa		11.12	□□□□□ -0.63
TRMT1-223	ENST00000593257	TTC32	Q5I0X7	151 aa		11.12	□□□□□ -0.63
TRMT1-223	ENST00000593257	C6orf48	Q9UBA6	75 aa		11.12	□□□□□ -0.63
TRMT1-223	ENST00000593257	TRBV20-1	A0A075B6N2	111 aa		11.11	□□□□□ -0.63
TRMT1-223	ENST00000593257	NDUFC2	O95298	119 aa		11.11	□□□□□ -0.63
TRMT1-223	ENST00000593257	COX6C	P09669	75 aa		11.11	□□□□□ -0.63
TRMT1-223	ENST00000593257	C9orf116	Q5BN46	136 aa	Predicted RBP	11.11	□□□□□ -0.63
TRMT1-223	ENST00000593257	STAB2	Q8WWQ8	2551 aa		11.11	□□□□□ -0.63
TRMT1-223	ENST00000593257	SYCN	Q0VAF6	134 aa		11.09	□□□□□ -0.63
TRMT1-223	ENST00000593257	COL7A1	Q02388	2944 aa		11.08	□□□□□ -0.64
TRMT1-223	ENST00000593257	USP17L23	D6RBM5	183 aa		11.08	□□□□□ -0.64
TRMT1-223	ENST00000593257	RNF151	Q2KHN1	245 aa		11.08	□□□□□ -0.64
TRMT1-223	ENST00000593257		Q6ZRU5	148 aa		11.08	□□□□□ -0.64
TRMT1-223	ENST00000593257	IGKV2-28	A0A075B6P5	120 aa		11.07	□□□□□ -0.64
TRMT1-223	ENST00000593257	TRIAP1	O43715	76 aa		11.07	□□□□□ -0.64
TRMT1-223	ENST00000593257	IGKV2D-28	P01615	120 aa		11.07	□□□□□ -0.64
TRMT1-223	ENST00000593257	NBDY	A0A0U1RRE5	68 aa		11.05	□□□□□ -0.64
TRMT1-223	ENST00000593257	LINC00337	Q8N6G1	96 aa		11.05	□□□□□ -0.64
TRMT1-223	ENST00000593257	CARD19	Q96LW7	228 aa		11.05	□□□□□ -0.64
TRMT1-223	ENST00000593257	KRTAP1-5	Q9BYS1	174 aa		11.05	□□□□□ -0.64
TRMT1-223	ENST00000593257	NDUFC2-KCTD14	E9PQ53	114 aa		11.04	□□□□□ -0.64
TRMT1-223	ENST00000593257	CASC10	Q5T4H9	136 aa		11.04	□□□□□ -0.64
TRMT1-223	ENST00000593257		H3BMG7	143 aa		11.03	□□□□□ -0.64
TRMT1-223	ENST00000593257	PSCA	O43653	123 aa		11.03	□□□□□ -0.64
TRMT1-223	ENST00000593257	TCL1B	O95988	128 aa		11.03	□□□□□ -0.64
TRMT1-223	ENST00000593257	ATXN8	Q156A1	80 aa		11.03	□□□□□ -0.64
TRMT1-223	ENST00000593257		F8W1H4	67 aa		11.02	□□□□□ -0.65
TRMT1-223	ENST00000593257	RPL28	P46779	137 aa	Known RBP	11.02	□□□□□ -0.65
TRMT1-223	ENST00000593257	C14orf177	Q52M58	125 aa		11.02	□□□□□ -0.65
TRMT1-223	ENST00000593257	OR13C6P	Q8NH95	151 aa		11.02	□□□□□ -0.65
TRMT1-223	ENST00000593257	MEGF8	Q7Z7M0	2845 aa		11.02	□□□□□ -0.65
TRMT1-223	ENST00000593257	TRBV10-2	A0A0K0K1G8	114 aa		11	□□□□□ -0.65
TRMT1-223	ENST00000593257	TLX1NB	P0CAT3	122 aa		11	□□□□□ -0.65
TRMT1-223	ENST00000593257	WWC2-AS2	Q96NR7	200 aa		10.99	□□□□□ -0.65

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