RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
TUBD1-211ENST00000591548 SPANXB1Q9NS25 103 aaPredicted RBP7.56□□□□□ -1.2
TUBD1-211ENST00000591548 HERV-K104P63124 156 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 BATFQ16520 125 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 TAL2Q16559 108 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 C15orf56Q8N910 161 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 LINC00526Q96FQ7 95 aa7.55□□□□□ -1.2
TUBD1-211ENST00000591548 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
TUBD1-211ENST00000591548 CEND1Q8N111 149 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 RMI2Q96E14 147 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 TMEM238C9JI98 176 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 TIMM17BO60830 172 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 GCSHP23434 173 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 CKS1BP61024 79 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 TM2D2Q9BX73 214 aa7.54□□□□□ -1.2
TUBD1-211ENST00000591548 A0A0U1RRA0 63 aa7.53□□□□□ -1.2
TUBD1-211ENST00000591548 FXYD2P54710 66 aa7.53□□□□□ -1.2
TUBD1-211ENST00000591548 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
TUBD1-211ENST00000591548 SFTA2Q6UW10 78 aa7.53□□□□□ -1.2
TUBD1-211ENST00000591548 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 CXCL5P42830 114 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
TUBD1-211ENST00000591548 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 MEIG1Q5JSS6 88 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 DAND5Q8N907 189 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
TUBD1-211ENST00000591548 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
TUBD1-211ENST00000591548 C3orf84H3BNL1 204 aa7.51□□□□□ -1.21
TUBD1-211ENST00000591548 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
TUBD1-211ENST00000591548 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
TUBD1-211ENST00000591548 DNAH10Q8IVF4 4471 aa7.51□□□□□ -1.21
TUBD1-211ENST00000591548 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
TUBD1-211ENST00000591548 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
TUBD1-211ENST00000591548 MUSTN1Q8IVN3 82 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 USP17L23D6RBM5 183 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 M0R2N4 97 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 PFN2P35080 140 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 C9orf116Q5BN46 136 aaPredicted RBP7.5□□□□□ -1.21
TUBD1-211ENST00000591548 Q6ZVH6 145 aa7.5□□□□□ -1.21
TUBD1-211ENST00000591548 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
TUBD1-211ENST00000591548 LINC00158P58513 81 aa7.49□□□□□ -1.21
TUBD1-211ENST00000591548 NPC2P61916 151 aa7.49□□□□□ -1.21
TUBD1-211ENST00000591548 TNP2Q05952 138 aa7.49□□□□□ -1.21
TUBD1-211ENST00000591548 LECT2O14960 151 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 LY6G6CO95867 125 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-211ENST00000591548 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 Q6ZR54 194 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 LINC00476Q8WZB0 136 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 C2orf48Q96LS8 159 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 CAMK2N2Q96S95 79 aa7.48□□□□□ -1.21
TUBD1-211ENST00000591548 IFITM1P13164 125 aa7.47□□□□□ -1.21
TUBD1-211ENST00000591548 WFDC2Q14508 124 aa7.47□□□□□ -1.21
TUBD1-211ENST00000591548 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
TUBD1-211ENST00000591548 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
TUBD1-211ENST00000591548 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
TUBD1-211ENST00000591548 A4D1N5 150 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 A6NDN8 102 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 PSCAO43653 123 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 SLPIP03973 132 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 COX17Q14061 63 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 Q6ZRU5 148 aa7.46□□□□□ -1.21
TUBD1-211ENST00000591548 KMT2AQ03164 3969 aa7.46□□□□□ -1.22
TUBD1-211ENST00000591548 A0A1B0GWB2 263 aa7.46□□□□□ -1.22
TUBD1-211ENST00000591548 K7ERJ3 54 aa7.46□□□□□ -1.22
TUBD1-211ENST00000591548 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
TUBD1-211ENST00000591548 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
TUBD1-211ENST00000591548 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
TUBD1-211ENST00000591548 F8WDY8 70 aa7.45□□□□□ -1.22
TUBD1-211ENST00000591548 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
TUBD1-211ENST00000591548 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
TUBD1-211ENST00000591548 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
TUBD1-211ENST00000591548 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
TUBD1-211ENST00000591548 CFC1P0CG37 223 aa7.44□□□□□ -1.22
TUBD1-211ENST00000591548 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
TUBD1-211ENST00000591548 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
TUBD1-211ENST00000591548 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
TUBD1-211ENST00000591548 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
TUBD1-211ENST00000591548 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
TUBD1-211ENST00000591548 A0A0B4J2C4 111 aa7.4□□□□□ -1.22
TUBD1-211ENST00000591548 NDUFC2-KCTD14E9PQ53 114 aa7.4□□□□□ -1.22
TUBD1-211ENST00000591548 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
TUBD1-211ENST00000591548 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms