RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 NREPQ16612 68 aa5.39□□□□□ -1.55
NEDD4L-229ENST00000590506 TMEM254Q8TBM7 123 aa5.39□□□□□ -1.55
NEDD4L-229ENST00000590506 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
NEDD4L-229ENST00000590506 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
NEDD4L-229ENST00000590506 A0A1W2PPR1 153 aa5.38□□□□□ -1.55
NEDD4L-229ENST00000590506 C10orf99Q6UWK7 81 aa5.38□□□□□ -1.55
NEDD4L-229ENST00000590506 LAMTOR3Q9UHA4 124 aa5.38□□□□□ -1.55
NEDD4L-229ENST00000590506 NCOR2Q9Y618 2525 aa5.38□□□□□ -1.55
NEDD4L-229ENST00000590506 ESRGQ1W209 222 aa5.37□□□□□ -1.55
NEDD4L-229ENST00000590506 IGHV4-38-2P0DP08 117 aa5.37□□□□□ -1.55
NEDD4L-229ENST00000590506 GYPEP15421 78 aa5.37□□□□□ -1.55
NEDD4L-229ENST00000590506 PLAC8L1A1L4L8 177 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 A6NDX4 124 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 C2CD3Q4AC94 2353 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 CREBBPQ92793 2442 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 TRGV1A0A0A0MS02 117 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 FUSP35637 526 aaKnown RBP eCLIP5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 CXCL6P80162 114 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 SPATA3Q8NHX4 192 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 CELSR1Q9NYQ6 3014 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 ATRXP46100 2492 aa5.36□□□□□ -1.55
NEDD4L-229ENST00000590506 LOC110117498A0A087WWA1 95 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 TMEM89A2RUT3 159 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 LRCOL1A6NCL2 159 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 BPY2O14599 106 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 PRYO14603 147 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 C6orf226Q5I0X4 101 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 CHD6Q8TD26 2715 aa5.35□□□□□ -1.55
NEDD4L-229ENST00000590506 IGLV4-60A0A075B6I1 120 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 A8MTW9 85 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 PKD1L2Q7Z442 2459 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 GNLYP22749 145 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 Q6ZTC4 211 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 C6orf223Q8N319 242 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 BAHCC1Q9P281 2608 aa5.34□□□□□ -1.55
NEDD4L-229ENST00000590506 LOC100131303A0A0U1RQF7 123 aa5.33□□□□□ -1.56
NEDD4L-229ENST00000590506 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
NEDD4L-229ENST00000590506 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
NEDD4L-229ENST00000590506 DAD1P61803 113 aa5.33□□□□□ -1.56
NEDD4L-229ENST00000590506 RETNQ9HD89 108 aa5.33□□□□□ -1.56
NEDD4L-229ENST00000590506 Q8N9L7 120 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 STHQ8IWL8 128 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 UBE2E2Q96LR5 201 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 HIGD2AQ9BW72 106 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 ACACBO00763 2458 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 ABCA2Q9BZC7 2435 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 FASNP49327 2511 aaKnown RBP5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 COL12A1Q99715 3063 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 INSP01308 110 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 Q6ZRU5 148 aa5.32□□□□□ -1.56
NEDD4L-229ENST00000590506 MUC7Q8TAX7 377 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 DYNLRB2Q8TF09 96 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 SETXQ7Z333 2677 aaKnown RBP5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 IGHV4-61A0A0C4DH41 118 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 ERC2-IT1O76042 136 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 VPREB1P12018 145 aa5.31□□□□□ -1.56
NEDD4L-229ENST00000590506 ZNF292O60281 2723 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 Q6ZQY7 126 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 Q8NDZ9 215 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 ZFYVE26Q68DK2 2539 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 PSPHP1O15172 72 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 CD164L2Q6UWJ8 174 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 Q6ZRP5 223 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 CEP295Q9C0D2 2601 aa5.3□□□□□ -1.56
NEDD4L-229ENST00000590506 C9orf66Q5T8R8 295 aa5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 C9orf116Q5BN46 136 aaPredicted RBP5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 C1orf158Q8N1D5 194 aa5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 LINC01006Q8NI28 216 aa5.29□□□□□ -1.56
NEDD4L-229ENST00000590506 LINC00959A0A1B0GUT2 108 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 IGHV4-59P01825 116 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 SLURP1P55000 103 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 PDE6GP18545 87 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 DEFB136Q30KP8 78 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 CLPSL2Q6UWE3 100 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 CSPG4Q6UVK1 2322 aa5.28□□□□□ -1.56
NEDD4L-229ENST00000590506 FLNBO75369 2602 aaKnown RBP5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 CD164Q04900 197 aa5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 NOP10Q9NPE3 64 aaKnown RBP5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 NOTCH3Q9UM47 2321 aa5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 TRGV2A0A075B6R0 118 aa5.27□□□□□ -1.57
NEDD4L-229ENST00000590506 Q1T7F1 81 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 C18orf65Q6ZTR6 163 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 Q8IZM0 81 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 LINC01356Q8N9X3 169 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 MAP1AP78559 2803 aaPredicted RBP5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 CR1P17927 2039 aa5.26□□□□□ -1.57
NEDD4L-229ENST00000590506 TRBV6-8A0A0A6YYG3 113 aa5.25□□□□□ -1.57
NEDD4L-229ENST00000590506 A8MU10 97 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms