RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 C2orf88Q9BSF0 95 aa7.04□□□□□ -1.28
SMAD4-211ENST00000590499 LINC00474Q9P2X8 69 aa7.04□□□□□ -1.28
SMAD4-211ENST00000590499 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-211ENST00000590499 F8WDY8 70 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-211ENST00000590499 G0S2P27469 103 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 Q6ZN92 141 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 SVBPQ8N300 66 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 VCX2Q9H322 139 aa7.03□□□□□ -1.28
SMAD4-211ENST00000590499 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
SMAD4-211ENST00000590499 SNAPINO95295 136 aa7.02□□□□□ -1.29
SMAD4-211ENST00000590499 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
SMAD4-211ENST00000590499 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
SMAD4-211ENST00000590499 B5MCH6 92 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 NDUFA1O15239 70 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 NDUFA5Q16718 116 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 ERASQ7Z444 233 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 YPEL4Q96NS1 127 aa7.01□□□□□ -1.29
SMAD4-211ENST00000590499 A0A0J9YXV3 536 aa7□□□□□ -1.29
SMAD4-211ENST00000590499 GAGE2BQ13066 116 aa7□□□□□ -1.29
SMAD4-211ENST00000590499 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
SMAD4-211ENST00000590499 URB1-AS1Q96HZ7 61 aa7□□□□□ -1.29
SMAD4-211ENST00000590499 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
SMAD4-211ENST00000590499 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 FA2HQ7L5A8 372 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 C18orf32Q8TCD1 76 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 SCGB3A1Q96QR1 104 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 TNXBP22105 4242 aa6.99□□□□□ -1.29
SMAD4-211ENST00000590499 A0A096LNJ9 63 aa6.98□□□□□ -1.29
SMAD4-211ENST00000590499 A0A1W2PNN7 141 aa6.98□□□□□ -1.29
SMAD4-211ENST00000590499 HERVK_113P63121 156 aa6.98□□□□□ -1.29
SMAD4-211ENST00000590499 SEC11AP67812 179 aa6.98□□□□□ -1.29
SMAD4-211ENST00000590499 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
SMAD4-211ENST00000590499 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
SMAD4-211ENST00000590499 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
SMAD4-211ENST00000590499 IGLV5-45A0A087WSX0 123 aa6.97□□□□□ -1.29
SMAD4-211ENST00000590499 OXTP01178 125 aa6.97□□□□□ -1.29
SMAD4-211ENST00000590499 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-211ENST00000590499 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
SMAD4-211ENST00000590499 Q6ZRP5 223 aa6.97□□□□□ -1.29
SMAD4-211ENST00000590499 SMCO4Q9NRQ5 59 aa6.97□□□□□ -1.29
SMAD4-211ENST00000590499 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
SMAD4-211ENST00000590499 Q8IZM0 81 aa6.96□□□□□ -1.3
SMAD4-211ENST00000590499 CST9LQ9H4G1 147 aa6.96□□□□□ -1.3
SMAD4-211ENST00000590499 TINCRA0A1B0GVN0 87 aa6.95□□□□□ -1.3
SMAD4-211ENST00000590499 LINC00614P0C842 121 aa6.95□□□□□ -1.3
SMAD4-211ENST00000590499 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
SMAD4-211ENST00000590499 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
SMAD4-211ENST00000590499 PMVKQ15126 192 aa6.94□□□□□ -1.3
SMAD4-211ENST00000590499 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
SMAD4-211ENST00000590499 LINC00469Q8N7U9 141 aa6.94□□□□□ -1.3
SMAD4-211ENST00000590499 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 HBDP02042 147 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 PRSS2P07478 247 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 PDZD11Q5EBL8 140 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-211ENST00000590499 TOMM7Q9P0U1 55 aa6.93□□□□□ -1.3
SMAD4-211ENST00000590499 ODF1Q14990 250 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
SMAD4-211ENST00000590499 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
SMAD4-211ENST00000590499 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SMAD4-211ENST00000590499 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
SMAD4-211ENST00000590499 CXCL5P42830 114 aa6.91□□□□□ -1.3
SMAD4-211ENST00000590499 RAB5BP61020 215 aa6.91□□□□□ -1.3
SMAD4-211ENST00000590499 CKS1BP61024 79 aa6.91□□□□□ -1.3
SMAD4-211ENST00000590499 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
SMAD4-211ENST00000590499 F8VRH5 84 aa6.9□□□□□ -1.3
SMAD4-211ENST00000590499 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMAD4-211ENST00000590499 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
SMAD4-211ENST00000590499 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
SMAD4-211ENST00000590499 ATP5LO75964 103 aa6.89□□□□□ -1.31
SMAD4-211ENST00000590499 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
SMAD4-211ENST00000590499 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-211ENST00000590499 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
SMAD4-211ENST00000590499 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
SMAD4-211ENST00000590499 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
SMAD4-211ENST00000590499 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-211ENST00000590499 SPINK6Q6UWN8 80 aa6.88□□□□□ -1.31
SMAD4-211ENST00000590499 H3BRM9 83 aa6.87□□□□□ -1.31
SMAD4-211ENST00000590499 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 M0QXV9 152 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 TRGC2P03986 189 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 NDUFA6P56556 154 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
SMAD4-211ENST00000590499 COLCA2A8K830 154 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms