RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
PDE4A-207ENST00000590407 LINC00526Q96FQ7 95 aa8.56□□□□□ -1.04
PDE4A-207ENST00000590407 ORMDL1Q9P0S3 153 aa8.56□□□□□ -1.04
PDE4A-207ENST00000590407 C2CD3Q4AC94 2353 aa8.56□□□□□ -1.04
PDE4A-207ENST00000590407 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
PDE4A-207ENST00000590407 ATOX1O00244 68 aa8.55□□□□□ -1.04
PDE4A-207ENST00000590407 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
PDE4A-207ENST00000590407 OR13C6PQ8NH95 151 aa8.55□□□□□ -1.04
PDE4A-207ENST00000590407 MUC7Q8TAX7 377 aa8.55□□□□□ -1.04
PDE4A-207ENST00000590407 X6R8D5 127 aa8.55□□□□□ -1.04
PDE4A-207ENST00000590407 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 XCL1P47992 114 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 HILS1P60008 231 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 C14orf132Q9NPU4 83 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
PDE4A-207ENST00000590407 ZFYVE26Q68DK2 2539 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 DEFB130BP0DP73 79 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 DEFB130AP0DP74 79 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 NANOS2P60321 138 aaKnown RBP8.53□□□□□ -1.04
PDE4A-207ENST00000590407 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 COX7CP15954 63 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 ITPR3Q14573 2671 aa8.53□□□□□ -1.04
PDE4A-207ENST00000590407 TLN2Q9Y4G6 2542 aa8.52□□□□□ -1.04
PDE4A-207ENST00000590407 CCKP06307 115 aa8.52□□□□□ -1.05
PDE4A-207ENST00000590407 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
PDE4A-207ENST00000590407 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
PDE4A-207ENST00000590407 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
PDE4A-207ENST00000590407 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
PDE4A-207ENST00000590407 CENPEQ02224 2701 aa8.51□□□□□ -1.05
PDE4A-207ENST00000590407 CRYGAP11844 174 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 RPL18AQ02543 176 aaKnown RBP8.5□□□□□ -1.05
PDE4A-207ENST00000590407 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 Q8N814 137 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 SONP18583 2426 aaKnown RBP8.5□□□□□ -1.05
PDE4A-207ENST00000590407 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 NCR3O14931 201 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 ATP5EP2Q5VTU8 51 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
PDE4A-207ENST00000590407 SETXQ7Z333 2677 aaKnown RBP8.49□□□□□ -1.05
PDE4A-207ENST00000590407 APCP25054 2843 aa8.49□□□□□ -1.05
PDE4A-207ENST00000590407 SMIM20Q8N5G0 67 aa8.49□□□□□ -1.05
PDE4A-207ENST00000590407 C11orf68Q9H3H3 251 aaKnown RBP8.49□□□□□ -1.05
PDE4A-207ENST00000590407 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
PDE4A-207ENST00000590407 JMJD1CQ15652 2540 aa8.48□□□□□ -1.05
PDE4A-207ENST00000590407 SLPIP03973 132 aa8.48□□□□□ -1.05
PDE4A-207ENST00000590407 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
PDE4A-207ENST00000590407 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.05
PDE4A-207ENST00000590407 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.06
PDE4A-207ENST00000590407 REG3AQ06141 175 aa8.45□□□□□ -1.06
PDE4A-207ENST00000590407 IGKV3D-7A0A0C4DH55 119 aa8.45□□□□□ -1.06
PDE4A-207ENST00000590407 H3BQ85 93 aa8.45□□□□□ -1.06
PDE4A-207ENST00000590407 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
PDE4A-207ENST00000590407 CLPSL2Q6UWE3 100 aa8.45□□□□□ -1.06
PDE4A-207ENST00000590407 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
PDE4A-207ENST00000590407 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 LINC00575Q6W349 94 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 SERP2Q8N6R1 65 aa8.44□□□□□ -1.06
PDE4A-207ENST00000590407 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
PDE4A-207ENST00000590407 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
PDE4A-207ENST00000590407 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
PDE4A-207ENST00000590407 APOC4P55056 127 aa8.43□□□□□ -1.06
PDE4A-207ENST00000590407 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
PDE4A-207ENST00000590407 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
PDE4A-207ENST00000590407 LELP1Q5T871 98 aa8.42□□□□□ -1.06
PDE4A-207ENST00000590407 NF1P21359 2839 aa8.42□□□□□ -1.06
PDE4A-207ENST00000590407 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 A0A096LPF7 62 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 DAD1P61803 113 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
PDE4A-207ENST00000590407 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
PDE4A-207ENST00000590407 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
PDE4A-207ENST00000590407 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
PDE4A-207ENST00000590407 Q8NDZ9 215 aa8.4□□□□□ -1.06
PDE4A-207ENST00000590407 UPK3BQ9BT76 320 aa8.4□□□□□ -1.06
PDE4A-207ENST00000590407 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.06
PDE4A-207ENST00000590407 MIFP14174 115 aa8.4□□□□□ -1.07
PDE4A-207ENST00000590407 SPAG11BQ08648 103 aa8.4□□□□□ -1.07
PDE4A-207ENST00000590407 C6orf223Q8N319 242 aa8.4□□□□□ -1.07
PDE4A-207ENST00000590407 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
PDE4A-207ENST00000590407 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
PDE4A-207ENST00000590407 Q8NAQ8 132 aa8.39□□□□□ -1.07
PDE4A-207ENST00000590407 IGLV10-54A0A075B6I4 117 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 BCE1O60756 84 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 Q6ZQT0 140 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 UBL5Q9BZL1 73 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 PDE6GP18545 87 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 TMEM258P61165 79 aa8.38□□□□□ -1.07
PDE4A-207ENST00000590407 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
PDE4A-207ENST00000590407 A0A087WVE0 104 aa8.37□□□□□ -1.07
PDE4A-207ENST00000590407 DEFB135Q30KP9 77 aa8.37□□□□□ -1.07
PDE4A-207ENST00000590407 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
PDE4A-207ENST00000590407 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
PDE4A-207ENST00000590407 Q8N3U1 123 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms