RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 SPATA25Q9BR10 227 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 GAGE12HA6NDE8 117 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 A8MZ25 164 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 IBA57-AS1B1ANH7 110 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 TRIAP1O43715 76 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 ATP5G1P05496 136 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 ANKRD29Q8N6D5 301 aa7.42□□□□□ -1.22
ZNF540-208ENST00000589857 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
ZNF540-208ENST00000589857 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-208ENST00000589857 SPART-AS1P0CW21 52 aa7.41□□□□□ -1.22
ZNF540-208ENST00000589857 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-208ENST00000589857 IGHV3OR16-9A0A0B4J2B5 98 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 CRPP02741 224 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 CXCL5P42830 114 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 NPC2P61916 151 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 MTURNQ8N3F0 131 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 CARD19Q96LW7 228 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 RYR3Q15413 4870 aa7.4□□□□□ -1.22
ZNF540-208ENST00000589857 IGLV4-60A0A075B6I1 120 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 IGHV4-28A0A0C4DH34 117 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 LST1O00453 97 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 COX7A2LO14548 114 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 MRPL23Q16540 153 aaKnown RBP7.39□□□□□ -1.23
ZNF540-208ENST00000589857 DEFB135Q30KP9 77 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 Q8IZM0 81 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 TOMM7Q9P0U1 55 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 NACAE9PAV3 2078 aa7.39□□□□□ -1.23
ZNF540-208ENST00000589857 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
ZNF540-208ENST00000589857 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
ZNF540-208ENST00000589857 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
ZNF540-208ENST00000589857 LINC00158P58513 81 aa7.37□□□□□ -1.23
ZNF540-208ENST00000589857 CFAP161Q6P656 301 aa7.37□□□□□ -1.23
ZNF540-208ENST00000589857 DAND5Q8N907 189 aa7.37□□□□□ -1.23
ZNF540-208ENST00000589857 MUC7Q8TAX7 377 aa7.37□□□□□ -1.23
ZNF540-208ENST00000589857 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
ZNF540-208ENST00000589857 TRACP01848 142 aa7.36□□□□□ -1.23
ZNF540-208ENST00000589857 CD164L2Q6UWJ8 174 aa7.36□□□□□ -1.23
ZNF540-208ENST00000589857 Q8NAQ8 132 aa7.36□□□□□ -1.23
ZNF540-208ENST00000589857 SORL1Q92673 2214 aa7.35□□□□□ -1.23
ZNF540-208ENST00000589857 CASC10Q5T4H9 136 aa7.35□□□□□ -1.23
ZNF540-208ENST00000589857 LELP1Q5T871 98 aa7.35□□□□□ -1.23
ZNF540-208ENST00000589857 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
ZNF540-208ENST00000589857 SND1-IT1Q9HBX3 110 aa7.35□□□□□ -1.23
ZNF540-208ENST00000589857 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 H0YGX0 51 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 IGHV4-30-4P0DP06 118 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
ZNF540-208ENST00000589857 XCL1P47992 114 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 CKS1BP61024 79 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 COX17Q14061 63 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
ZNF540-208ENST00000589857 NTN5Q8WTR8 489 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-208ENST00000589857 H3BNG1 76 aa7.33□□□□□ -1.24
ZNF540-208ENST00000589857 MALP21145 153 aa7.33□□□□□ -1.24
ZNF540-208ENST00000589857 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
ZNF540-208ENST00000589857 TRAV8-4A0A0B4J246 113 aa7.32□□□□□ -1.24
ZNF540-208ENST00000589857 ANGP03950 147 aaKnown RBP7.32□□□□□ -1.24
ZNF540-208ENST00000589857 REG3AQ06141 175 aa7.32□□□□□ -1.24
ZNF540-208ENST00000589857 C21orf62-AS1Q17RA5 79 aa7.32□□□□□ -1.24
ZNF540-208ENST00000589857 CLEC2BQ92478 149 aa7.32□□□□□ -1.24
ZNF540-208ENST00000589857 LCE6AA0A183 80 aa7.31□□□□□ -1.24
ZNF540-208ENST00000589857 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
ZNF540-208ENST00000589857 SNCGO76070 127 aa7.31□□□□□ -1.24
ZNF540-208ENST00000589857 ACYP1P07311 99 aa7.31□□□□□ -1.24
ZNF540-208ENST00000589857 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-208ENST00000589857 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
ZNF540-208ENST00000589857 DNAH3Q8TD57 4116 aa7.3□□□□□ -1.24
ZNF540-208ENST00000589857 CCL18P55774 89 aa7.3□□□□□ -1.24
ZNF540-208ENST00000589857 LINC00269Q8N2A0 174 aa7.3□□□□□ -1.24
ZNF540-208ENST00000589857 C11orf68Q9H3H3 251 aaKnown RBP7.3□□□□□ -1.24
ZNF540-208ENST00000589857 A0A096LPF7 62 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 NDUFC2O95298 119 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 DNAL4O96015 105 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 INAFM2P0DMQ5 153 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 HTN3P15516 51 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 PFN2P35080 140 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 CELA1Q9UNI1 258 aa7.29□□□□□ -1.24
ZNF540-208ENST00000589857 KLK5Q9Y337 293 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-208ENST00000589857 A0A1B0GX51 115 aa7.28□□□□□ -1.24
ZNF540-208ENST00000589857 DEFB4AO15263 64 aa7.28□□□□□ -1.24
ZNF540-208ENST00000589857 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 A0A1B0GV72 72 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 CLPSL2Q6UWE3 100 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
ZNF540-208ENST00000589857 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
ZNF540-208ENST00000589857 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
ZNF540-208ENST00000589857 BAALC-AS2P0C853 105 aa7.25□□□□□ -1.25
ZNF540-208ENST00000589857 KIAA0087Q14695 138 aa7.25□□□□□ -1.25
ZNF540-208ENST00000589857 F8WDY8 70 aa7.24□□□□□ -1.25
ZNF540-208ENST00000589857 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
ZNF540-208ENST00000589857 SMIM11BQ8TCY0 68 aa7.24□□□□□ -1.25
ZNF540-208ENST00000589857 TMEM126AQ9H061 195 aa7.24□□□□□ -1.25
ZNF540-208ENST00000589857 GVQW2A0A096LPI5 108 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-208ENST00000589857 Q6Q795 121 aa7.23□□□□□ -1.25
ZNF540-208ENST00000589857 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
ZNF540-208ENST00000589857 A0A0J9YWU9 116 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms