RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DAD1P61803 113 aa5.15□□□□□ -1.58
ZNF540-206ENST00000589117 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.58
ZNF540-206ENST00000589117 C5orf38Q86SI9 138 aa5.15□□□□□ -1.58
ZNF540-206ENST00000589117 ACANP16112 2415 aa5.15□□□□□ -1.58
ZNF540-206ENST00000589117 NBPF19A0A087WUL8 3843 aa5.15□□□□□ -1.58
ZNF540-206ENST00000589117 H0YGX0 51 aa5.15□□□□□ -1.59
ZNF540-206ENST00000589117 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
ZNF540-206ENST00000589117 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.59
ZNF540-206ENST00000589117 XGP55808 180 aa5.15□□□□□ -1.59
ZNF540-206ENST00000589117 MRPL23Q16540 153 aaKnown RBP5.15□□□□□ -1.59
ZNF540-206ENST00000589117 MTORP42345 2549 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 DNAL4O96015 105 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 MIFP14174 115 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 XCL1P47992 114 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 CKS1BP61024 79 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 Q8IZM0 81 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 INAFM1C9JVW0 142 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 ATP5G1P05496 136 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 CXCL5P42830 114 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 GAGE2BQ13066 116 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 GAGE2EQ4V326 116 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 DEFB121Q5J5C9 76 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 GAGE2DQ9UEU5 116 aa5.14□□□□□ -1.59
ZNF540-206ENST00000589117 SETXQ7Z333 2677 aaKnown RBP5.14□□□□□ -1.59
ZNF540-206ENST00000589117 SPART-AS1P0CW21 52 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 PFN2P35080 140 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 DEFB135Q30KP9 77 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 ITPR2Q14571 2701 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 UNC79Q9P2D8 2635 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 JMJD1CQ15652 2540 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 BAALC-AS2P0C853 105 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 INAFM2P0DMQ5 153 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 VPREB1P12018 145 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 COX17Q14061 63 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 CD164L2Q6UWJ8 174 aa5.13□□□□□ -1.59
ZNF540-206ENST00000589117 CCL18P55774 89 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 CUBNO60494 3623 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 C2CD3Q4AC94 2353 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 IGHV4-28A0A0C4DH34 117 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 ANGP03950 147 aaKnown RBP5.12□□□□□ -1.59
ZNF540-206ENST00000589117 TTC32Q5I0X7 151 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 LINC00269Q8N2A0 174 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 CITED1Q99966 193 aa5.12□□□□□ -1.59
ZNF540-206ENST00000589117 NIPBLQ6KC79 2804 aaeCLIP5.11□□□□□ -1.59
ZNF540-206ENST00000589117 A0A096LPF7 62 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 Q6Q795 121 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 HELZ2Q9BYK8 2649 aaKnown RBP5.11□□□□□ -1.59
ZNF540-206ENST00000589117 IGKV2-28A0A075B6P5 120 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 IGKV2D-28P01615 120 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 REG3AQ06141 175 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 LINC00337Q8N6G1 96 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 WFDC9Q8NEX5 89 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 MUC7Q8TAX7 377 aa5.11□□□□□ -1.59
ZNF540-206ENST00000589117 C15orf53Q8NAA6 179 aa5.1□□□□□ -1.59
ZNF540-206ENST00000589117 SMIM11BQ8TCY0 68 aa5.1□□□□□ -1.59
ZNF540-206ENST00000589117 CHCHD10Q8WYQ3 142 aaPredicted RBP5.1□□□□□ -1.59
ZNF540-206ENST00000589117 ANAPC13Q9BS18 74 aa5.1□□□□□ -1.59
ZNF540-206ENST00000589117 CLPSL2Q6UWE3 100 aa5.09□□□□□ -1.59
ZNF540-206ENST00000589117 C11orf68Q9H3H3 251 aaKnown RBP5.09□□□□□ -1.59
ZNF540-206ENST00000589117 DEFB4AO15263 64 aa5.09□□□□□ -1.59
ZNF540-206ENST00000589117 NDUFC2O95298 119 aa5.09□□□□□ -1.59
ZNF540-206ENST00000589117 LELP1Q5T871 98 aa5.09□□□□□ -1.59
ZNF540-206ENST00000589117 Q8NAQ8 132 aa5.09□□□□□ -1.59
ZNF540-206ENST00000589117 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
ZNF540-206ENST00000589117 KMT2BQ9UMN6 2715 aaPredicted RBP5.08□□□□□ -1.6
ZNF540-206ENST00000589117 FASNP49327 2511 aaKnown RBP5.08□□□□□ -1.6
ZNF540-206ENST00000589117 A0A1B0GX51 115 aa5.08□□□□□ -1.6
ZNF540-206ENST00000589117 IGHV4-30-4P0DP06 118 aa5.08□□□□□ -1.6
ZNF540-206ENST00000589117 HTN3P15516 51 aa5.08□□□□□ -1.6
ZNF540-206ENST00000589117 IMUPQ9GZP8 106 aa5.08□□□□□ -1.6
ZNF540-206ENST00000589117 Q8N3U1 123 aa5.07□□□□□ -1.6
ZNF540-206ENST00000589117 KLK5Q9Y337 293 aaPredicted RBP5.07□□□□□ -1.6
ZNF540-206ENST00000589117 IGLV10-54A0A075B6I4 117 aa5.07□□□□□ -1.6
ZNF540-206ENST00000589117 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
ZNF540-206ENST00000589117 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
ZNF540-206ENST00000589117 Q9HAA7 133 aa5.07□□□□□ -1.6
ZNF540-206ENST00000589117 NDUFV3P56181 108 aaKnown RBP5.06□□□□□ -1.6
ZNF540-206ENST00000589117 LINC00643Q86TS7 51 aa5.06□□□□□ -1.6
ZNF540-206ENST00000589117 FN1P02751 2386 aaKnown RBP5.06□□□□□ -1.6
ZNF540-206ENST00000589117 KIAA0087Q14695 138 aa5.06□□□□□ -1.6
ZNF540-206ENST00000589117 ORMDL1Q9P0S3 153 aa5.06□□□□□ -1.6
ZNF540-206ENST00000589117 H3BNG1 76 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 LECT2O14960 151 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 S100A7L2Q5SY68 101 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 CELA1Q9UNI1 258 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
ZNF540-206ENST00000589117 A0A087WYN8 130 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 PRR34Q9NV39 138 aa5.05□□□□□ -1.6
ZNF540-206ENST00000589117 TRBV7-7A0A0K0K1E9 115 aa5.04□□□□□ -1.6
ZNF540-206ENST00000589117 TMEM256-PLSCR3K7ERE1 68 aa5.04□□□□□ -1.6
ZNF540-206ENST00000589117 KLK12Q9UKR0 248 aa5.04□□□□□ -1.6
ZNF540-206ENST00000589117 JMJD7-PLA2G4BH0Y9G9 81 aa5.03□□□□□ -1.6
ZNF540-206ENST00000589117 NOTCH2Q04721 2471 aa5.03□□□□□ -1.6
ZNF540-206ENST00000589117 LYPD5Q6UWN5 251 aa5.03□□□□□ -1.6
ZNF540-206ENST00000589117 A0A0J9YWU9 116 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms