RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SEC11AP67812 179 aa12.84□□□□□ -0.35
MBD3-205ENST00000589064 GEMIN7Q9H840 131 aaKnown RBP12.84□□□□□ -0.35
MBD3-205ENST00000589064 CDKN2A-AS1Q9UH64 79 aa12.84□□□□□ -0.35
MBD3-205ENST00000589064 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
MBD3-205ENST00000589064 FAM168BA1KXE4 195 aa12.83□□□□□ -0.36
MBD3-205ENST00000589064 PRSS2P07478 247 aa12.83□□□□□ -0.36
MBD3-205ENST00000589064 C6orf226Q5I0X4 101 aa12.83□□□□□ -0.36
MBD3-205ENST00000589064 FA2HQ7L5A8 372 aa12.83□□□□□ -0.36
MBD3-205ENST00000589064 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
MBD3-205ENST00000589064 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
MBD3-205ENST00000589064 SPINK6Q6UWN8 80 aa12.81□□□□□ -0.36
MBD3-205ENST00000589064 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
MBD3-205ENST00000589064 TRGC2P03986 189 aa12.8□□□□□ -0.36
MBD3-205ENST00000589064 CKS1BP61024 79 aa12.8□□□□□ -0.36
MBD3-205ENST00000589064 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
MBD3-205ENST00000589064 Q8IZM0 81 aa12.79□□□□□ -0.36
MBD3-205ENST00000589064 C18orf32Q8TCD1 76 aa12.79□□□□□ -0.36
MBD3-205ENST00000589064 NDUFC2-KCTD14E9PQ53 114 aa12.78□□□□□ -0.36
MBD3-205ENST00000589064 FAM19A5Q7Z5A7 132 aaPredicted RBP12.78□□□□□ -0.36
MBD3-205ENST00000589064 CST9LQ9H4G1 147 aa12.78□□□□□ -0.36
MBD3-205ENST00000589064 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
MBD3-205ENST00000589064 TINCRA0A1B0GVN0 87 aa12.77□□□□□ -0.37
MBD3-205ENST00000589064 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.37
MBD3-205ENST00000589064 LINC01600Q96MT4 127 aa12.77□□□□□ -0.37
MBD3-205ENST00000589064 PMVKQ15126 192 aa12.75□□□□□ -0.37
MBD3-205ENST00000589064 C1orf137Q5JT78 98 aa12.75□□□□□ -0.37
MBD3-205ENST00000589064 C9orf129Q5T035 196 aaKnown RBP12.75□□□□□ -0.37
MBD3-205ENST00000589064 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
MBD3-205ENST00000589064 URB1-AS1Q96HZ7 61 aa12.75□□□□□ -0.37
MBD3-205ENST00000589064 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
MBD3-205ENST00000589064 LINC00614P0C842 121 aa12.73□□□□□ -0.37
MBD3-205ENST00000589064 REG3GQ6UW15 175 aa12.73□□□□□ -0.37
MBD3-205ENST00000589064 HMCN2Q8NDA2 5059 aa12.72□□□□□ -0.37
MBD3-205ENST00000589064 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
MBD3-205ENST00000589064 A0A096LNJ9 63 aa12.72□□□□□ -0.37
MBD3-205ENST00000589064 F8VRH5 84 aa12.72□□□□□ -0.37
MBD3-205ENST00000589064 PDZD11Q5EBL8 140 aa12.72□□□□□ -0.37
MBD3-205ENST00000589064 M0QXV9 152 aa12.71□□□□□ -0.38
MBD3-205ENST00000589064 COX7B2Q8TF08 81 aa12.71□□□□□ -0.38
MBD3-205ENST00000589064 PLA2G2DQ9UNK4 145 aa12.71□□□□□ -0.38
MBD3-205ENST00000589064 SPINK8P0C7L1 97 aa12.7□□□□□ -0.38
MBD3-205ENST00000589064 NDUFA6P56556 154 aa12.7□□□□□ -0.38
MBD3-205ENST00000589064 RAB5BP61020 215 aa12.7□□□□□ -0.38
MBD3-205ENST00000589064 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
MBD3-205ENST00000589064 CXCL5P42830 114 aa12.69□□□□□ -0.38
MBD3-205ENST00000589064 XAGE1AQ9HD64 81 aa12.69□□□□□ -0.38
MBD3-205ENST00000589064 UBE2BP63146 152 aa12.68□□□□□ -0.38
MBD3-205ENST00000589064 IGLV7-43P04211 117 aa12.67□□□□□ -0.38
MBD3-205ENST00000589064 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
MBD3-205ENST00000589064 TNXBP22105 4242 aa12.66□□□□□ -0.38
MBD3-205ENST00000589064 HBDP02042 147 aa12.66□□□□□ -0.38
MBD3-205ENST00000589064 BAGE3Q86Y29 109 aa12.66□□□□□ -0.38
MBD3-205ENST00000589064 H3BRM9 83 aa12.65□□□□□ -0.38
MBD3-205ENST00000589064 IGLC3P0DOY3 106 aa12.65□□□□□ -0.38
MBD3-205ENST00000589064 ODF1Q14990 250 aa12.65□□□□□ -0.38
MBD3-205ENST00000589064 CHCHD1Q96BP2 118 aaKnown RBP12.65□□□□□ -0.38
MBD3-205ENST00000589064 C22orf24Q9Y442 160 aa12.64□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BNQ99877 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 HIST1H2BMQ99879 126 aa12.62□□□□□ -0.39
MBD3-205ENST00000589064 SERF1AO75920 110 aa12.61□□□□□ -0.39
MBD3-205ENST00000589064 ATP5LO75964 103 aa12.61□□□□□ -0.39
MBD3-205ENST00000589064 DIRC1Q969H9 104 aa12.61□□□□□ -0.39
MBD3-205ENST00000589064 HSBP1O75506 76 aa12.6□□□□□ -0.39
MBD3-205ENST00000589064 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
MBD3-205ENST00000589064 LINC00310P59036 64 aa12.6□□□□□ -0.39
MBD3-205ENST00000589064 IGLV5-39A0A0G2JS06 123 aa12.59□□□□□ -0.39
MBD3-205ENST00000589064 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
MBD3-205ENST00000589064 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.4
MBD3-205ENST00000589064 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
MBD3-205ENST00000589064 H0Y9J4 135 aa12.57□□□□□ -0.4
MBD3-205ENST00000589064 NUPR1O60356 82 aa12.57□□□□□ -0.4
MBD3-205ENST00000589064 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
MBD3-205ENST00000589064 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
MBD3-205ENST00000589064 PFN2P35080 140 aa12.54□□□□□ -0.4
MBD3-205ENST00000589064 TP73-AS1Q9UF72 201 aa12.54□□□□□ -0.4
MBD3-205ENST00000589064 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
MBD3-205ENST00000589064 PRR26Q8N8Z3 221 aa12.53□□□□□ -0.4
MBD3-205ENST00000589064 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
MBD3-205ENST00000589064 LINC00167Q96N53 147 aa12.52□□□□□ -0.41
MBD3-205ENST00000589064 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
MBD3-205ENST00000589064 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
MBD3-205ENST00000589064 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
MBD3-205ENST00000589064 ZNF861PO60384 105 aa12.5□□□□□ -0.41
MBD3-205ENST00000589064 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
MBD3-205ENST00000589064 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
MBD3-205ENST00000589064 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
MBD3-205ENST00000589064 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
MBD3-205ENST00000589064 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
MBD3-205ENST00000589064 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
MBD3-205ENST00000589064 FABP4P15090 132 aa12.46□□□□□ -0.41
MBD3-205ENST00000589064 NKAPP1Q8N9T2 125 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms