RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 IGKV2D-24A0A075B6R9 120 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 CXCL5P42830 114 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 TM2D2Q9BX73 214 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 RYR3Q15413 4870 aa7.05□□□□□ -1.28
CHMP1B-202ENST00000588284 GCSHP23434 173 aa7.04□□□□□ -1.28
CHMP1B-202ENST00000588284 CKS1BP61024 79 aa7.04□□□□□ -1.28
CHMP1B-202ENST00000588284 TTC32Q5I0X7 151 aa7.04□□□□□ -1.28
CHMP1B-202ENST00000588284 ZNF625Q96I27 306 aaPredicted RBP7.04□□□□□ -1.28
CHMP1B-202ENST00000588284 F8WDY8 70 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 BVES-AS1Q5T3Y7 98 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 CEND1Q8N111 149 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 COPS9Q8WXC6 57 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 Q9HAA7 133 aa7.03□□□□□ -1.28
CHMP1B-202ENST00000588284 A6NDN8 102 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 IFITM1P13164 125 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 KIAA0087Q14695 138 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 BATFQ16520 125 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
CHMP1B-202ENST00000588284 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
CHMP1B-202ENST00000588284 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
CHMP1B-202ENST00000588284 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
CHMP1B-202ENST00000588284 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
CHMP1B-202ENST00000588284 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
CHMP1B-202ENST00000588284 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
CHMP1B-202ENST00000588284 C2orf48Q96LS8 159 aa7□□□□□ -1.29
CHMP1B-202ENST00000588284 COL7A1Q02388 2944 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 NBDYA0A0U1RRE5 68 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 LINC00158P58513 81 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 COX17Q14061 63 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 LITAFQ99732 161 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 PPDPFQ9H3Y8 114 aa6.99□□□□□ -1.29
CHMP1B-202ENST00000588284 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
CHMP1B-202ENST00000588284 SMIM13P0DJ93 91 aa6.98□□□□□ -1.29
CHMP1B-202ENST00000588284 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
CHMP1B-202ENST00000588284 MUSTN1Q8IVN3 82 aa6.98□□□□□ -1.29
CHMP1B-202ENST00000588284 ERG28Q9UKR5 140 aa6.98□□□□□ -1.29
CHMP1B-202ENST00000588284 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
CHMP1B-202ENST00000588284 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
CHMP1B-202ENST00000588284 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
CHMP1B-202ENST00000588284 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
CHMP1B-202ENST00000588284 PSCAO43653 123 aa6.96□□□□□ -1.3
CHMP1B-202ENST00000588284 FXYD2P54710 66 aa6.96□□□□□ -1.3
CHMP1B-202ENST00000588284 CASC10Q5T4H9 136 aa6.96□□□□□ -1.3
CHMP1B-202ENST00000588284 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
CHMP1B-202ENST00000588284 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 PFN2P35080 140 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 LINC00308Q8TCZ7 52 aa6.95□□□□□ -1.3
CHMP1B-202ENST00000588284 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 A4D1N5 150 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 USP17L23D6RBM5 183 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 RNF151Q2KHN1 245 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
CHMP1B-202ENST00000588284 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
CHMP1B-202ENST00000588284 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
CHMP1B-202ENST00000588284 LOC107984156A0A0G2JMH3 177 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 LY6G6CO95867 125 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 C10orf25Q5T742 122 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 ARL17AQ8IVW1 177 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 DAND5Q8N907 189 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
CHMP1B-202ENST00000588284 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 CFC1P0CG37 223 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 NPC2P61916 151 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 PRO1854Q9UHT4 67 aa6.91□□□□□ -1.3
CHMP1B-202ENST00000588284 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
CHMP1B-202ENST00000588284 M0R2N4 97 aa6.9□□□□□ -1.3
CHMP1B-202ENST00000588284 Q6ZR54 194 aa6.9□□□□□ -1.3
CHMP1B-202ENST00000588284 Q6ZRU5 148 aa6.9□□□□□ -1.3
CHMP1B-202ENST00000588284 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
CHMP1B-202ENST00000588284 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
CHMP1B-202ENST00000588284 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
CHMP1B-202ENST00000588284 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
CHMP1B-202ENST00000588284 SOSTDC1Q6X4U4 206 aa6.89□□□□□ -1.31
CHMP1B-202ENST00000588284 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
CHMP1B-202ENST00000588284 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
CHMP1B-202ENST00000588284 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
CHMP1B-202ENST00000588284 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
CHMP1B-202ENST00000588284 NDUFC2O95298 119 aa6.88□□□□□ -1.31
CHMP1B-202ENST00000588284 K7ERJ3 54 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms