RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 CUX1P39880 1505 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 LRRC9Q6ZRR7 1453 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 A0A087WWC5 75 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 S100A3P33764 101 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 LINC00846Q9NV44 126 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 UBE2D4Q9Y2X8 147 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 INTS1Q8N201 2190 aaKnown RBP1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 ITSN1Q15811 1721 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 CRYBG1Q9Y4K1 1723 aa1.01□□□□□ -2.25
CACNA1A-208ENST00000587451 COL4A1P02462 1669 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 H0Y9P7 68 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 SFTA3P0C7M3 94 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 COX8AP10176 69 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 IFI27P40305 119 aaPredicted RBP1□□□□□ -2.25
CACNA1A-208ENST00000587451 C10orf113Q5VZT2 155 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 Q6ZRX8 168 aa1□□□□□ -2.25
CACNA1A-208ENST00000587451 ASXL1Q8IXJ9 1541 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 SDK1Q7Z5N4 2213 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 A0A096LNT2 108 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 GVQW2A0A096LPI5 108 aaPredicted RBP0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 TRBV7-4A0A0J9YYF1 115 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 A0A1B0GUT8 65 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 G3V318 75 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 HAMPP81172 84 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 SPATA8Q6RVD6 105 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 SMIM11BQ8TCY0 68 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 TMEM263Q8WUH6 116 aaKnown RBP0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 PLAC4Q8WY50 150 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 PLAC8Q9NZF1 115 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 GNG13Q9P2W3 67 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 SHPRHQ149N8 1683 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 NHSL1Q5SYE7 1610 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 C1orf167Q5SNV9 1468 aa0.99□□□□□ -2.25
CACNA1A-208ENST00000587451 RGPD1P0DJD0 1748 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 C5P01031 1676 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 PIK3C2BO00750 1634 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 TARBP1Q13395 1621 aaKnown RBP0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 RAPGEF6Q8TEU7 1601 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 ANKRD36A6QL64 1941 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 ATP5EP2Q5VTU8 51 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 CEP170BQ9Y4F5 1589 aaPredicted RBP0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 ATP7BP35670 1465 aa0.98□□□□□ -2.25
CACNA1A-208ENST00000587451 ZNF831Q5JPB2 1677 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 MED13LQ71F56 2210 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 ABCA9Q8IUA7 1624 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 SSC5DA1L4H1 1573 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 NCOA6Q14686 2063 aaPredicted RBP0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 TRAV21A0A0B4J279 112 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 A0A1B0GU69 56 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 IFI6P09912 130 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 LINC00575Q6W349 94 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 PKD1L3Q7Z443 1732 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 EEA1Q15075 1411 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 CCDC180Q9P1Z9 1646 aa0.97□□□□□ -2.25
CACNA1A-208ENST00000587451 CDC42BPGQ6DT37 1551 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 TRBV6-1A0A0K0K1D8 114 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 SPINK13Q1W4C9 94 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 DEFB112Q30KQ8 113 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 SSBP3-AS1Q7Z2R9 100 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 WFDC9Q8NEX5 89 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 NKTRP30414 1462 aaKnown RBP0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 LRP6O75581 1613 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 MAP2P11137 1827 aaKnown RBP0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 DNAJC13O75165 2243 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 PAPPA2Q9BXP8 1791 aa0.96□□□□□ -2.26
CACNA1A-208ENST00000587451 LRRC37A2A6NM11 1700 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 URB2Q14146 1524 aaKnown RBP0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 FXYD6-FXYD2A0A087WZ82 144 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 RPL37P61927 97 aaKnown RBP0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 ATXN8Q156A1 80 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 FAM103A1Q9BTL3 118 aaKnown RBP0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 ALKQ9UM73 1620 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 TIAM2Q8IVF5 1701 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 MYO7AQ13402 2215 aa0.95□□□□□ -2.26
CACNA1A-208ENST00000587451 LMTK2Q8IWU2 1503 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 LRRC7Q96NW7 1537 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 PREX1Q8TCU6 1659 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 CD163L1Q9NR16 1453 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 HMGA1P17096 107 aaKnown RBP0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 SMIM5Q71RC9 77 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 GAFA1Q96PS6 74 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 TIAM1Q13009 1591 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 DIP2AQ14689 1571 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 SAMD9Q5K651 1589 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 XRN1Q8IZH2 1706 aaKnown RBP0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 UBR3Q6ZT12 1888 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 ABCA10Q8WWZ4 1543 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 PLCH1Q4KWH8 1693 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 ABCA1O95477 2261 aa0.94□□□□□ -2.26
CACNA1A-208ENST00000587451 PREX2Q70Z35 1606 aa0.93□□□□□ -2.26
CACNA1A-208ENST00000587451 LINC00959A0A1B0GUT2 108 aa0.93□□□□□ -2.26
CACNA1A-208ENST00000587451 NDUFB1O75438 58 aa0.93□□□□□ -2.26
CACNA1A-208ENST00000587451 NREPQ16612 68 aa0.93□□□□□ -2.26
CACNA1A-208ENST00000587451 WIZO95785 1651 aa0.93□□□□□ -2.26
CACNA1A-208ENST00000587451 KIAA0556O60303 1618 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms