RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 F6UZH7 168 aa-0.96□□□□□ -2.56
SMARCE1-219ENST00000583294 ATP5EP56381 51 aaPredicted RBP-0.96□□□□□ -2.56
SMARCE1-219ENST00000583294 SFTA2Q6UW10 78 aa-0.96□□□□□ -2.56
SMARCE1-219ENST00000583294 MANBALQ9NQG1 85 aa-0.96□□□□□ -2.56
SMARCE1-219ENST00000583294 NALCNQ8IZF0 1738 aa-0.96□□□□□ -2.56
SMARCE1-219ENST00000583294 C1orf167Q5SNV9 1468 aa-0.97□□□□□ -2.56
SMARCE1-219ENST00000583294 EHBP1L1Q8N3D4 1523 aa-0.97□□□□□ -2.56
SMARCE1-219ENST00000583294 COX6CP09669 75 aa-0.97□□□□□ -2.56
SMARCE1-219ENST00000583294 TRAPPC2P0DI81 140 aa-0.98□□□□□ -2.57
SMARCE1-219ENST00000583294 TRAPPC2BP0DI82 140 aa-0.98□□□□□ -2.57
SMARCE1-219ENST00000583294 LCN9Q8WX39 176 aa-0.98□□□□□ -2.57
SMARCE1-219ENST00000583294 MYOM2P54296 1465 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 USH2AO75445 5202 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 FAM223BA6NKX1 122 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 UBE2D3P61077 147 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 UBE2D2P62837 147 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 SEC11AP67812 179 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 Q0VG73 95 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 LINC00846Q9NV44 126 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 STARD9Q9P2P6 4700 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 SCAPERQ9BY12 1400 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 ADGRL2O95490 1459 aa-0.99□□□□□ -2.57
SMARCE1-219ENST00000583294 PRO1854Q9UHT4 67 aa-1□□□□□ -2.57
SMARCE1-219ENST00000583294 CCDC141Q6ZP82 1450 aa-1□□□□□ -2.57
SMARCE1-219ENST00000583294 SCN7AQ01118 1682 aa-1□□□□□ -2.57
SMARCE1-219ENST00000583294 A0A0G2JMZ2 1700 aa-1.01□□□□□ -2.57
SMARCE1-219ENST00000583294 A0A1B0GV90 55 aa-1.01□□□□□ -2.57
SMARCE1-219ENST00000583294 NAP1L6A6NFF2 107 aa-1.01□□□□□ -2.57
SMARCE1-219ENST00000583294 C12orf57Q99622 126 aa-1.01□□□□□ -2.57
SMARCE1-219ENST00000583294 CRIPTQ9P021 101 aa-1.01□□□□□ -2.57
SMARCE1-219ENST00000583294 SAA2P0DJI9 122 aaPredicted RBP-1.02□□□□□ -2.57
SMARCE1-219ENST00000583294 SPRR2FQ96RM1 72 aa-1.02□□□□□ -2.57
SMARCE1-219ENST00000583294 FMN2Q9NZ56 1722 aa-1.02□□□□□ -2.57
SMARCE1-219ENST00000583294 DIP2CQ9Y2E4 1556 aa-1.03□□□□□ -2.57
SMARCE1-219ENST00000583294 HIVEP1P15822 2718 aa-1.03□□□□□ -2.57
SMARCE1-219ENST00000583294 H1FX-AS1Q4G0G2 97 aa-1.03□□□□□ -2.57
SMARCE1-219ENST00000583294 SVBPQ8N300 66 aa-1.03□□□□□ -2.57
SMARCE1-219ENST00000583294 C9orf62Q8N4C0 152 aa-1.03□□□□□ -2.57
SMARCE1-219ENST00000583294 PKD1P98161 4303 aa-1.03□□□□□ -2.58
SMARCE1-219ENST00000583294 XRN1Q8IZH2 1706 aaKnown RBP-1.03□□□□□ -2.58
SMARCE1-219ENST00000583294 PLEKHH2Q8IVE3 1493 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 MRC2Q9UBG0 1479 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 A0A1B0GU69 56 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 I3L3M4 83 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 DLEU1O43261 78 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 IER3IP1Q9Y5U9 82 aa-1.04□□□□□ -2.58
SMARCE1-219ENST00000583294 NKTRP30414 1462 aaKnown RBP-1.05□□□□□ -2.58
SMARCE1-219ENST00000583294 NLRP1Q9C000 1473 aa-1.05□□□□□ -2.58
SMARCE1-219ENST00000583294 MT1AP04731 61 aa-1.05□□□□□ -2.58
SMARCE1-219ENST00000583294 DEFB112Q30KQ8 113 aa-1.05□□□□□ -2.58
SMARCE1-219ENST00000583294 DNAH6Q9C0G6 4158 aa-1.05□□□□□ -2.58
SMARCE1-219ENST00000583294 RYR1P21817 5038 aa-1.06□□□□□ -2.58
SMARCE1-219ENST00000583294 GNG4P50150 75 aa-1.06□□□□□ -2.58
SMARCE1-219ENST00000583294 HYDINQ4G0P3 5121 aa-1.06□□□□□ -2.58
SMARCE1-219ENST00000583294 PAPPA2Q9BXP8 1791 aa-1.06□□□□□ -2.58
SMARCE1-219ENST00000583294 TOP2BQ02880 1626 aa-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 SONP18583 2426 aaKnown RBP-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 TACC2O95359 2948 aa-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 EPG5Q9HCE0 2579 aa-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 H3BQ15 152 aa-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 PPP3R1P63098 170 aa-1.07□□□□□ -2.58
SMARCE1-219ENST00000583294 A0A087WVE0 104 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 EFCAB10A6NFE3 127 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 CRYM-AS1A6NIL9 109 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 C6orf201Q7Z4U5 140 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 UBR4Q5T4S7 5183 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 MUC17Q685J3 4493 aa-1.08□□□□□ -2.58
SMARCE1-219ENST00000583294 FAT3Q8TDW7 4589 aa-1.09□□□□□ -2.58
SMARCE1-219ENST00000583294 SNCAP37840 140 aa-1.09□□□□□ -2.58
SMARCE1-219ENST00000583294 KRTDAPP60985 99 aa-1.09□□□□□ -2.58
SMARCE1-219ENST00000583294 CGREF1Q99674 301 aa-1.09□□□□□ -2.58
SMARCE1-219ENST00000583294 VAMP8Q9BV40 100 aa-1.09□□□□□ -2.58
SMARCE1-219ENST00000583294 C7orf77A4D0Y5 90 aa-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 H3BQF6 201 aa-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 S100A1P23297 94 aa-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 EDC4Q6P2E9 1401 aaKnown RBP-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 ITPR3Q14573 2671 aa-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 NUP188Q5SRE5 1749 aa-1.1□□□□□ -2.59
SMARCE1-219ENST00000583294 KIAA1109Q2LD37 5005 aa-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 SPTBN4Q9H254 2564 aa-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 A0A0G2JND7 137 aa-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 TMEM262E9PQX1 116 aa-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 CORTO00230 105 aa-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 MRPL34Q9BQ48 92 aaKnown RBP-1.11□□□□□ -2.59
SMARCE1-219ENST00000583294 MARF1Q9Y4F3 1742 aaKnown RBP-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 CCL22O00626 93 aa-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 ARHGAP5Q13017 1502 aa-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 EPPK1P58107 5090 aaKnown RBP-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 HTTP42858 3142 aa-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 USP9YO00507 2555 aaPredicted RBP-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 VPS13DQ5THJ4 4388 aa-1.12□□□□□ -2.59
SMARCE1-219ENST00000583294 NRKQ7Z2Y5 1582 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 DOPEY1Q5JWR5 2465 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 H0Y9P7 68 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 GNGT1P63211 74 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 HSD52Q0P140 79 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 DEFB107AQ8IZN7 70 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 NBPF19A0A087WUL8 3843 aa-1.13□□□□□ -2.59
SMARCE1-219ENST00000583294 MAPKBP1O60336 1514 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms