RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 Q8IZM0 81 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 ORMDL2Q53FV1 153 aa6.29□□□□□ -1.4
RFFL-209ENST00000581265 ALKBH7Q9BT30 221 aaPredicted RBP6.29□□□□□ -1.4
RFFL-209ENST00000581265 TOMM7Q9P0U1 55 aa6.29□□□□□ -1.4
RFFL-209ENST00000581265 SEC11AP67812 179 aa6.28□□□□□ -1.4
RFFL-209ENST00000581265 LINC00469Q8N7U9 141 aa6.28□□□□□ -1.4
RFFL-209ENST00000581265 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
RFFL-209ENST00000581265 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
RFFL-209ENST00000581265 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
RFFL-209ENST00000581265 F8VRH5 84 aa6.27□□□□□ -1.41
RFFL-209ENST00000581265 HERVK_113P63121 156 aa6.27□□□□□ -1.41
RFFL-209ENST00000581265 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
RFFL-209ENST00000581265 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
RFFL-209ENST00000581265 CDKN2A-AS1Q9UH64 79 aa6.27□□□□□ -1.41
RFFL-209ENST00000581265 G0S2P27469 103 aa6.26□□□□□ -1.41
RFFL-209ENST00000581265 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
RFFL-209ENST00000581265 PNRC1Q12796 327 aaPredicted RBP6.26□□□□□ -1.41
RFFL-209ENST00000581265 MRPL55Q7Z7F7 128 aaKnown RBP6.26□□□□□ -1.41
RFFL-209ENST00000581265 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
RFFL-209ENST00000581265 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
RFFL-209ENST00000581265 A0A1B0GVG6 124 aa6.25□□□□□ -1.41
RFFL-209ENST00000581265 BCE1O60756 84 aa6.25□□□□□ -1.41
RFFL-209ENST00000581265 TSPAN13O95857 204 aa6.25□□□□□ -1.41
RFFL-209ENST00000581265 MT-ND4LP03901 98 aa6.25□□□□□ -1.41
RFFL-209ENST00000581265 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
RFFL-209ENST00000581265 GEMIN7Q9H840 131 aaKnown RBP6.25□□□□□ -1.41
RFFL-209ENST00000581265 A0A087X002 238 aa6.24□□□□□ -1.41
RFFL-209ENST00000581265 CRYGAP11844 174 aa6.24□□□□□ -1.41
RFFL-209ENST00000581265 CXCL5P42830 114 aa6.24□□□□□ -1.41
RFFL-209ENST00000581265 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
RFFL-209ENST00000581265 ERASQ7Z444 233 aa6.23□□□□□ -1.41
RFFL-209ENST00000581265 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
RFFL-209ENST00000581265 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
RFFL-209ENST00000581265 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
RFFL-209ENST00000581265 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
RFFL-209ENST00000581265 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
RFFL-209ENST00000581265 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
RFFL-209ENST00000581265 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
RFFL-209ENST00000581265 RPL37AP8A6NKH3 93 aa6.21□□□□□ -1.42
RFFL-209ENST00000581265 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
RFFL-209ENST00000581265 COX7B2Q8TF08 81 aa6.2□□□□□ -1.42
RFFL-209ENST00000581265 SCGB3A1Q96QR1 104 aa6.2□□□□□ -1.42
RFFL-209ENST00000581265 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 ADCYAP1P18509 176 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
RFFL-209ENST00000581265 LINC01546A6NGU7 62 aa6.18□□□□□ -1.42
RFFL-209ENST00000581265 RAB5BP61020 215 aa6.18□□□□□ -1.42
RFFL-209ENST00000581265 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
RFFL-209ENST00000581265 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
RFFL-209ENST00000581265 UBE2AP49459 152 aa6.17□□□□□ -1.42
RFFL-209ENST00000581265 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
RFFL-209ENST00000581265 MRPL18Q9H0U6 180 aaKnown RBP6.17□□□□□ -1.42
RFFL-209ENST00000581265 TRAV9-1A0A075B6T8 112 aa6.16□□□□□ -1.42
RFFL-209ENST00000581265 SPINK8P0C7L1 97 aa6.16□□□□□ -1.42
RFFL-209ENST00000581265 RAB14P61106 215 aa6.16□□□□□ -1.42
RFFL-209ENST00000581265 CTAG1AP78358 180 aa6.16□□□□□ -1.42
RFFL-209ENST00000581265 PMVKQ15126 192 aa6.16□□□□□ -1.42
RFFL-209ENST00000581265 ATP5LO75964 103 aa6.15□□□□□ -1.42
RFFL-209ENST00000581265 LINC00304Q8N9R0 145 aa6.15□□□□□ -1.42
RFFL-209ENST00000581265 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 H3BRM9 83 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 RETNLBQ9BQ08 111 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 GNB1LQ9BYB4 327 aa6.14□□□□□ -1.43
RFFL-209ENST00000581265 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
RFFL-209ENST00000581265 SCO1O75880 301 aa6.13□□□□□ -1.43
RFFL-209ENST00000581265 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
RFFL-209ENST00000581265 VPREB1P12018 145 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 PFN2P35080 140 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 PRLHP81277 87 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 COX17Q14061 63 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 CDIP1Q9H305 208 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
RFFL-209ENST00000581265 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
RFFL-209ENST00000581265 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
RFFL-209ENST00000581265 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
RFFL-209ENST00000581265 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
RFFL-209ENST00000581265 FA2HQ7L5A8 372 aa6.11□□□□□ -1.43
RFFL-209ENST00000581265 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
RFFL-209ENST00000581265 TMEM218A2RU14 115 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 M0R378 163 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 COX19Q49B96 90 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 ERG28Q9UKR5 140 aa6.1□□□□□ -1.43
RFFL-209ENST00000581265 ZNF22P17026 224 aaPredicted RBP6.09□□□□□ -1.43
RFFL-209ENST00000581265 S100PP25815 95 aa6.09□□□□□ -1.43
RFFL-209ENST00000581265 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
RFFL-209ENST00000581265 UQCC3Q6UW78 93 aa6.09□□□□□ -1.43
RFFL-209ENST00000581265 A0A096LNJ9 63 aa6.08□□□□□ -1.44
RFFL-209ENST00000581265 FABP9Q0Z7S8 132 aa6.08□□□□□ -1.44
RFFL-209ENST00000581265 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
RFFL-209ENST00000581265 SFTA2Q6UW10 78 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms