RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 COX17Q14061 63 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 C6orf226Q5I0X4 101 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 Q8IZM0 81 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 KIR2DL5BQ8NHK3 375 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 SMIM11BQ8TCY0 68 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 C16orf95Q9H693 158 aa4.04□□□□□ -1.76
PTPRM-212ENST00000580838 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
PTPRM-212ENST00000580838 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
PTPRM-212ENST00000580838 RPL18AQ02543 176 aaKnown RBP4.03□□□□□ -1.76
PTPRM-212ENST00000580838 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
PTPRM-212ENST00000580838 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
PTPRM-212ENST00000580838 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-212ENST00000580838 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 LINC00959A0A1B0GUT2 108 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 CRYGAP11844 174 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 CFAP161Q6P656 301 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 Q6ZTC4 211 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 MAPK1IP1LQ8NDC0 245 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 SMCR5Q8TEV8 140 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 NRGNQ92686 78 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 FAM218AQ96MZ4 157 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 LINC00167Q96N53 147 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 CSPG4Q6UVK1 2322 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 CHD8Q9HCK8 2581 aa4.02□□□□□ -1.77
PTPRM-212ENST00000580838 NCOR2Q9Y618 2525 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 ANKRD17O75179 2603 aaKnown RBP4.01□□□□□ -1.77
PTPRM-212ENST00000580838 PLAC8L1A1L4L8 177 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 LYRM9A8MSI8 78 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 J3KT08 172 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 LECT2O14960 151 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 BCE1O60756 84 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 CCKP06307 115 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 LINC00612Q8N6U2 182 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 Q9HAA7 133 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 CELSR1Q9NYQ6 3014 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 SPTBN4Q9H254 2564 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 CFAP46Q8IYW2 2715 aa4.01□□□□□ -1.77
PTPRM-212ENST00000580838 PKD1L2Q7Z442 2459 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 A0A087WYN8 130 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 TRBV10-3A0A0K0K1G6 114 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 hADV29S1A0JD25 119 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 GIG44P09565 113 aaPredicted RBP4□□□□□ -1.77
PTPRM-212ENST00000580838 RPL35AP18077 110 aaKnown RBP4□□□□□ -1.77
PTPRM-212ENST00000580838 PDE6GP18545 87 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 PFN2P35080 140 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 TMEM258P61165 79 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
PTPRM-212ENST00000580838 CD164L2Q6UWJ8 174 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 CSNK1G2-AS1Q8NCQ2 148 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 PRO0255Q9UI72 69 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 C22orf24Q9Y442 160 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 SPG11Q96JI7 2443 aa4□□□□□ -1.77
PTPRM-212ENST00000580838 MYO18BQ8IUG5 2567 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 IGLV4-60A0A075B6I1 120 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 IGHV4-28A0A0C4DH34 117 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 LOC100131303A0A0U1RQF7 123 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 UBL5Q9BZL1 73 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 C14orf132Q9NPU4 83 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 SORL1Q92673 2214 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 FLNCQ14315 2725 aa3.99□□□□□ -1.77
PTPRM-212ENST00000580838 USP9XQ93008 2570 aaPredicted RBP3.99□□□□□ -1.77
PTPRM-212ENST00000580838 MYO9AB2RTY4 2548 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 USP9YO00507 2555 aaPredicted RBP3.98□□□□□ -1.77
PTPRM-212ENST00000580838 MXRA5Q9NR99 2828 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 MT3P25713 68 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 XCL1P47992 114 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 Q8N814 137 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 LINC01006Q8NI28 216 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 CELSR2Q9HCU4 2923 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 CR1P17927 2039 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 CACNA1AO00555 2505 aa3.98□□□□□ -1.77
PTPRM-212ENST00000580838 DCHS1Q96JQ0 3298 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 ACACBO00763 2458 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 NAV2Q8IVL1 2488 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-212ENST00000580838 USP17L23D6RBM5 183 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 APOC4P55056 127 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 C2orf48Q96LS8 159 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
PTPRM-212ENST00000580838 IGSF10Q6WRI0 2623 aa3.96□□□□□ -1.77
PTPRM-212ENST00000580838 UBR5O95071 2799 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-212ENST00000580838 LOC110117498A0A087WWA1 95 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 IGKV3D-7A0A0C4DH55 119 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 NCR3O14931 201 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 LYPD5Q6UWN5 251 aa3.96□□□□□ -1.78
PTPRM-212ENST00000580838 TRBV7-6A0A0J9YX20 115 aa3.95□□□□□ -1.78
PTPRM-212ENST00000580838 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
PTPRM-212ENST00000580838 C9orf66Q5T8R8 295 aa3.95□□□□□ -1.78
PTPRM-212ENST00000580838 LINC00575Q6W349 94 aa3.95□□□□□ -1.78
PTPRM-212ENST00000580838 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-212ENST00000580838 C11orf68Q9H3H3 251 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms