RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 LINC01549A6NIU2 74 aa16.61■□□□□ 0.25
LINC00271-207ENST00000580741 C6orf226Q5I0X4 101 aa16.61■□□□□ 0.25
LINC00271-207ENST00000580741 C18orf32Q8TCD1 76 aa16.61■□□□□ 0.25
LINC00271-207ENST00000580741 URB1-AS1Q96HZ7 61 aa16.61■□□□□ 0.25
LINC00271-207ENST00000580741 TNXBP22105 4242 aa16.61■□□□□ 0.25
LINC00271-207ENST00000580741 CKS1BP61024 79 aa16.6■□□□□ 0.25
LINC00271-207ENST00000580741 FAM19A5Q7Z5A7 132 aaPredicted RBP16.6■□□□□ 0.25
LINC00271-207ENST00000580741 Q8IZM0 81 aa16.6■□□□□ 0.25
LINC00271-207ENST00000580741 CST9LQ9H4G1 147 aa16.6■□□□□ 0.25
LINC00271-207ENST00000580741 MT1HL1P0DM35 61 aa16.59■□□□□ 0.25
LINC00271-207ENST00000580741 TINCRA0A1B0GVN0 87 aa16.58■□□□□ 0.24
LINC00271-207ENST00000580741 NDUFC2-KCTD14E9PQ53 114 aa16.58■□□□□ 0.24
LINC00271-207ENST00000580741 HMCN2Q8NDA2 5059 aa16.57■□□□□ 0.24
LINC00271-207ENST00000580741 A0A096LNJ9 63 aa16.57■□□□□ 0.24
LINC00271-207ENST00000580741 PSORS1C2Q9UIG4 136 aa16.57■□□□□ 0.24
LINC00271-207ENST00000580741 SMIM1B2RUZ4 78 aa16.56■□□□□ 0.24
LINC00271-207ENST00000580741 PMVKQ15126 192 aa16.56■□□□□ 0.24
LINC00271-207ENST00000580741 LINC00614P0C842 121 aa16.55■□□□□ 0.24
LINC00271-207ENST00000580741 PMCHL1Q16048 86 aa16.55■□□□□ 0.24
LINC00271-207ENST00000580741 KRTAP7-1Q8IUC3 87 aa16.55■□□□□ 0.24
LINC00271-207ENST00000580741 YPEL4Q96NS1 127 aa16.55■□□□□ 0.24
LINC00271-207ENST00000580741 IGLV5-45A0A087WSX0 123 aa16.54■□□□□ 0.24
LINC00271-207ENST00000580741 C9orf129Q5T035 196 aaKnown RBP16.54■□□□□ 0.24
LINC00271-207ENST00000580741 SPINK6Q6UWN8 80 aa16.53■□□□□ 0.24
LINC00271-207ENST00000580741 SPINK8P0C7L1 97 aa16.52■□□□□ 0.24
LINC00271-207ENST00000580741 SRSF9Q13242 221 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC00271-207ENST00000580741 KRTAP11-1Q8IUC1 163 aa16.52■□□□□ 0.24
LINC00271-207ENST00000580741 HBDP02042 147 aa16.51■□□□□ 0.23
LINC00271-207ENST00000580741 F8VRH5 84 aa16.5■□□□□ 0.23
LINC00271-207ENST00000580741 NDUFA6P56556 154 aa16.5■□□□□ 0.23
LINC00271-207ENST00000580741 PDZD11Q5EBL8 140 aa16.5■□□□□ 0.23
LINC00271-207ENST00000580741 C1orf137Q5JT78 98 aa16.5■□□□□ 0.23
LINC00271-207ENST00000580741 COX7B2Q8TF08 81 aa16.5■□□□□ 0.23
LINC00271-207ENST00000580741 M0QXV9 152 aa16.49■□□□□ 0.23
LINC00271-207ENST00000580741 CBLN2Q8IUK8 224 aa16.49■□□□□ 0.23
LINC00271-207ENST00000580741 SERTAD4-AS1Q5TG53 156 aa16.48■□□□□ 0.23
LINC00271-207ENST00000580741 CXCL5P42830 114 aa16.47■□□□□ 0.23
LINC00271-207ENST00000580741 XAGE1AQ9HD64 81 aa16.47■□□□□ 0.23
LINC00271-207ENST00000580741 RAB5BP61020 215 aa16.46■□□□□ 0.23
LINC00271-207ENST00000580741 IGLC3P0DOY3 106 aa16.45■□□□□ 0.22
LINC00271-207ENST00000580741 LINC01600Q96MT4 127 aa16.45■□□□□ 0.22
LINC00271-207ENST00000580741 H3BRM9 83 aa16.43■□□□□ 0.22
LINC00271-207ENST00000580741 UBE2BP63146 152 aa16.43■□□□□ 0.22
LINC00271-207ENST00000580741 REG3GQ6UW15 175 aa16.43■□□□□ 0.22
LINC00271-207ENST00000580741 SLC7A5P1Q8MH63 180 aa16.43■□□□□ 0.22
LINC00271-207ENST00000580741 ATP5LO75964 103 aa16.4■□□□□ 0.22
LINC00271-207ENST00000580741 IGLV7-43P04211 117 aa16.4■□□□□ 0.22
LINC00271-207ENST00000580741 ZNF22P17026 224 aaPredicted RBP16.4■□□□□ 0.22
LINC00271-207ENST00000580741 BAGE3Q86Y29 109 aa16.39■□□□□ 0.21
LINC00271-207ENST00000580741 C11orf86A6NJI1 115 aa16.37■□□□□ 0.21
LINC00271-207ENST00000580741 ODF1Q14990 250 aa16.37■□□□□ 0.21
LINC00271-207ENST00000580741 PLA2G2DQ9UNK4 145 aa16.37■□□□□ 0.21
LINC00271-207ENST00000580741 CHCHD1Q96BP2 118 aaKnown RBP16.36■□□□□ 0.21
LINC00271-207ENST00000580741 C22orf24Q9Y442 160 aa16.36■□□□□ 0.21
LINC00271-207ENST00000580741 IGLV5-39A0A0G2JS06 123 aa16.35■□□□□ 0.21
LINC00271-207ENST00000580741 TRGC2P03986 189 aa16.32■□□□□ 0.2
LINC00271-207ENST00000580741 KRTAP10-8P60410 259 aa16.32■□□□□ 0.2
LINC00271-207ENST00000580741 TMEM170BQ5T4T1 132 aa16.32■□□□□ 0.2
LINC00271-207ENST00000580741 CHTOPQ9Y3Y2 248 aaKnown RBP16.31■□□□□ 0.2
LINC00271-207ENST00000580741 DIRC1Q969H9 104 aa16.3■□□□□ 0.2
LINC00271-207ENST00000580741 IFI27L1Q96BM0 104 aa16.3■□□□□ 0.2
LINC00271-207ENST00000580741 FAM19A2Q8N3H0 131 aa16.29■□□□□ 0.2
LINC00271-207ENST00000580741 PFN2P35080 140 aa16.28■□□□□ 0.2
LINC00271-207ENST00000580741 LBHQ53QV2 105 aaPredicted RBP16.28■□□□□ 0.2
LINC00271-207ENST00000580741 HSBP1O75506 76 aa16.27■□□□□ 0.2
LINC00271-207ENST00000580741 MRPL55Q7Z7F7 128 aaKnown RBP16.27■□□□□ 0.2
LINC00271-207ENST00000580741 H0Y9J4 135 aa16.26■□□□□ 0.19
LINC00271-207ENST00000580741 TP73-AS1Q9UF72 201 aa16.26■□□□□ 0.19
LINC00271-207ENST00000580741 ZNF625Q96I27 306 aaPredicted RBP16.25■□□□□ 0.19
LINC00271-207ENST00000580741 TRAV12-1A0A0B4J245 112 aa16.24■□□□□ 0.19
LINC00271-207ENST00000580741 GAGE10A6NGK3 116 aa16.23■□□□□ 0.19
LINC00271-207ENST00000580741 ERG28Q9UKR5 140 aa16.23■□□□□ 0.19
LINC00271-207ENST00000580741 LINC00310P59036 64 aa16.22■□□□□ 0.19
LINC00271-207ENST00000580741 LINC00167Q96N53 147 aa16.22■□□□□ 0.19
LINC00271-207ENST00000580741 RPL37AP8A6NKH3 93 aa16.21■□□□□ 0.19
LINC00271-207ENST00000580741 SERF1AO75920 110 aa16.21■□□□□ 0.19
LINC00271-207ENST00000580741 NUPR1O60356 82 aa16.2■□□□□ 0.18
LINC00271-207ENST00000580741 TMEM223A0PJW6 202 aa16.19■□□□□ 0.18
LINC00271-207ENST00000580741 COLCA2A8K830 154 aa16.19■□□□□ 0.18
LINC00271-207ENST00000580741 H0Y8G0 127 aa16.19■□□□□ 0.18
LINC00271-207ENST00000580741 IGLV5-37A0A075B6J1 123 aa16.18■□□□□ 0.18
LINC00271-207ENST00000580741 SCO1O75880 301 aa16.18■□□□□ 0.18
LINC00271-207ENST00000580741 PRR26Q8N8Z3 221 aa16.18■□□□□ 0.18
LINC00271-207ENST00000580741 NKAPP1Q8N9T2 125 aa16.18■□□□□ 0.18
LINC00271-207ENST00000580741 SND1-IT1Q9HBX3 110 aa16.18■□□□□ 0.18
LINC00271-207ENST00000580741 UBR4Q5T4S7 5183 aa16.16■□□□□ 0.18
LINC00271-207ENST00000580741 ZNF861PO60384 105 aa16.16■□□□□ 0.18
LINC00271-207ENST00000580741 KRTAP1-4P0C5Y4 121 aa16.15■□□□□ 0.18
LINC00271-207ENST00000580741 LEPROTL1O95214 131 aa16.14■□□□□ 0.17
LINC00271-207ENST00000580741 BCE1O60756 84 aa16.13■□□□□ 0.17
LINC00271-207ENST00000580741 COX17Q14061 63 aa16.13■□□□□ 0.17
LINC00271-207ENST00000580741 SFTA2Q6UW10 78 aa16.13■□□□□ 0.17
LINC00271-207ENST00000580741 A0A0U1RRA0 63 aa16.11■□□□□ 0.17
LINC00271-207ENST00000580741 VPREB1P12018 145 aa16.11■□□□□ 0.17
LINC00271-207ENST00000580741 IGKV2-28A0A075B6P5 120 aa16.1■□□□□ 0.17
LINC00271-207ENST00000580741 IGKV2D-28P01615 120 aa16.1■□□□□ 0.17
LINC00271-207ENST00000580741 Q8NDZ9 215 aa16.1■□□□□ 0.17
LINC00271-207ENST00000580741 FABP4P15090 132 aa16.09■□□□□ 0.17
LINC00271-207ENST00000580741 LINC00158P58513 81 aa16.09■□□□□ 0.17
LINC00271-207ENST00000580741 LRP2P98164 4655 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms