RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 NDUFA1O15239 70 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 PAX4O43316 350 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 TIMM17BO60830 172 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 CFC1P0CG37 223 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
RFFL-207ENST00000580569 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
RFFL-207ENST00000580569 ABCA13Q86UQ4 5058 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 TRAV26-1A0A087WT03 109 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 TRAV13-1A0A0B4J241 112 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 ATP5G1P05496 136 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 SPART-AS1P0CW21 52 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 DAD1P61803 113 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 ADAMTSL4-AS1Q5T5F5 129 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.54
RFFL-207ENST00000580569 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.54
RFFL-207ENST00000580569 TMEM238C9JI98 176 aa5.39□□□□□ -1.55
RFFL-207ENST00000580569 RBX1P62877 108 aa5.39□□□□□ -1.55
RFFL-207ENST00000580569 CHCHD5Q9BSY4 110 aa5.39□□□□□ -1.55
RFFL-207ENST00000580569 A0A096LPF7 62 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 A0A0B4J2C4 111 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 LINC00959A0A1B0GUT2 108 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 TSPAN13O95857 204 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 FABP2P12104 132 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 MIAQ16674 131 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 GTF2H5Q6ZYL4 71 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 Q8N3U1 123 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 RETNQ9HD89 108 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 SPCS1Q9Y6A9 102 aa5.38□□□□□ -1.55
RFFL-207ENST00000580569 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 A0A087WZ39 114 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 TEX48A0A1B0GUV7 120 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 IGHV3-33P01772 117 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 LINC01561Q8N1V8 128 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 C11orf68Q9H3H3 251 aaKnown RBP5.37□□□□□ -1.55
RFFL-207ENST00000580569 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
RFFL-207ENST00000580569 DNAH2Q9P225 4427 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 H3BNG1 76 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 APOMO95445 188 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 LY6G6CO95867 125 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 IFITM1P13164 125 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
RFFL-207ENST00000580569 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
RFFL-207ENST00000580569 LELP1Q5T871 98 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 Q9H8V8 135 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 PRO1854Q9UHT4 67 aa5.36□□□□□ -1.55
RFFL-207ENST00000580569 HERV-K104P63124 156 aa5.35□□□□□ -1.55
RFFL-207ENST00000580569 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
RFFL-207ENST00000580569 SH2D6Q7Z4S9 175 aa5.35□□□□□ -1.55
RFFL-207ENST00000580569 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
RFFL-207ENST00000580569 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
RFFL-207ENST00000580569 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.55
RFFL-207ENST00000580569 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.34□□□□□ -1.55
RFFL-207ENST00000580569 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
RFFL-207ENST00000580569 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
RFFL-207ENST00000580569 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.55
RFFL-207ENST00000580569 DNAH11Q96DT5 4516 aa5.34□□□□□ -1.56
RFFL-207ENST00000580569 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 TMEM262E9PQX1 116 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 SS18Q15532 418 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 LYPD5Q6UWN5 251 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 PRR34Q9NV39 138 aa5.33□□□□□ -1.56
RFFL-207ENST00000580569 NUPR2A6NF83 97 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 HTN3P15516 51 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 CIRBPQ14011 172 aaKnown RBP5.32□□□□□ -1.56
RFFL-207ENST00000580569 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 Q6ZTC4 211 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 LINC00269Q8N2A0 174 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 DAND5Q8N907 189 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
RFFL-207ENST00000580569 PKD1P98161 4303 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 A0A0J9YWU9 116 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 H3BMG7 143 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 TCL1BO95988 128 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 PRSS2P07478 247 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 REG3AQ06141 175 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 Q8IZM0 81 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 ERG28Q9UKR5 140 aa5.31□□□□□ -1.56
RFFL-207ENST00000580569 IBA57-AS1B1ANH7 110 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 F8W1H4 67 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 XCL1P47992 114 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 NPC2P61916 151 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 OCIAD2Q56VL3 154 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 SFTA2Q6UW10 78 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 CLPSL2Q6UWE3 100 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 ENHOQ6UWT2 76 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
RFFL-207ENST00000580569 HSPG2P98160 4391 aa5.3□□□□□ -1.56
RFFL-207ENST00000580569 TRBV20-1A0A075B6N2 111 aa5.29□□□□□ -1.56
RFFL-207ENST00000580569 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
RFFL-207ENST00000580569 ANGP03950 147 aaKnown RBP5.29□□□□□ -1.56
RFFL-207ENST00000580569 NANOS2P60321 138 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms