RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -1
CDK5RAP3-217ENST00000580287 GAGE2BQ13066 116 aa8.84□□□□□ -1
CDK5RAP3-217ENST00000580287 GAGE2EQ4V326 116 aa8.84□□□□□ -1
CDK5RAP3-217ENST00000580287 Q6ZTC4 211 aa8.84□□□□□ -1
CDK5RAP3-217ENST00000580287 GAGE2DQ9UEU5 116 aa8.84□□□□□ -1
CDK5RAP3-217ENST00000580287 NDUFV3P56181 108 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 ATXN8Q156A1 80 aa8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 Q1RN00 199 aa8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 TMEM101Q96IK0 257 aa8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 LITAFQ99732 161 aa8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
CDK5RAP3-217ENST00000580287 PAX4O43316 350 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 ATP5G1P05496 136 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 PRO0255Q9UI72 69 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
CDK5RAP3-217ENST00000580287 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 HERVK_113P63121 156 aa8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 PRKDCP78527 4128 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
CDK5RAP3-217ENST00000580287 TRAV8-4A0A0B4J246 113 aa8.8□□□□□ -1
CDK5RAP3-217ENST00000580287 CCDC179H3BU77 68 aa8.8□□□□□ -1
CDK5RAP3-217ENST00000580287 TRIAP1O43715 76 aa8.8□□□□□ -1
CDK5RAP3-217ENST00000580287 LINC01600Q96MT4 127 aa8.8□□□□□ -1
CDK5RAP3-217ENST00000580287 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
CDK5RAP3-217ENST00000580287 IFITM1P13164 125 aa8.79□□□□□ -1
CDK5RAP3-217ENST00000580287 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
CDK5RAP3-217ENST00000580287 TTC32Q5I0X7 151 aa8.79□□□□□ -1
CDK5RAP3-217ENST00000580287 C11orf45Q8TAV5 145 aa8.79□□□□□ -1
CDK5RAP3-217ENST00000580287 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 Q6Q795 121 aa8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 C15orf53Q8NAA6 179 aa8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 UBE2WQ96B02 151 aa8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 PPDPFQ9H3Y8 114 aa8.78□□□□□ -1
CDK5RAP3-217ENST00000580287 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1.01
CDK5RAP3-217ENST00000580287 Q9H8V8 135 aa8.77□□□□□ -1.01
CDK5RAP3-217ENST00000580287 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
CDK5RAP3-217ENST00000580287 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
CDK5RAP3-217ENST00000580287 SMIM1B2RUZ4 78 aa8.76□□□□□ -1.01
CDK5RAP3-217ENST00000580287 H7C423 109 aa8.76□□□□□ -1.01
CDK5RAP3-217ENST00000580287 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
CDK5RAP3-217ENST00000580287 NDUFA1O15239 70 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 MIAQ16674 131 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 Q8N3U1 123 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 H3BS24 57 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 KRTAP21-3Q3LHN1 58 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
CDK5RAP3-217ENST00000580287 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
CDK5RAP3-217ENST00000580287 IGLV5-39A0A0G2JS06 123 aa8.73□□□□□ -1.01
CDK5RAP3-217ENST00000580287 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
CDK5RAP3-217ENST00000580287 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
CDK5RAP3-217ENST00000580287 SPANXCQ9NY87 97 aa8.73□□□□□ -1.01
CDK5RAP3-217ENST00000580287 H3BT86 120 aa8.72□□□□□ -1.01
CDK5RAP3-217ENST00000580287 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
CDK5RAP3-217ENST00000580287 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
CDK5RAP3-217ENST00000580287 TGP01266 2768 aa8.71□□□□□ -1.01
CDK5RAP3-217ENST00000580287 FAM19A3Q7Z5A8 133 aa8.71□□□□□ -1.01
CDK5RAP3-217ENST00000580287 VPREB1P12018 145 aa8.71□□□□□ -1.02
CDK5RAP3-217ENST00000580287 COX6CP09669 75 aa8.7□□□□□ -1.02
CDK5RAP3-217ENST00000580287 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
CDK5RAP3-217ENST00000580287 USP17L23D6RBM5 183 aa8.7□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LST1O00453 97 aa8.7□□□□□ -1.02
CDK5RAP3-217ENST00000580287 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
CDK5RAP3-217ENST00000580287 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
CDK5RAP3-217ENST00000580287 CSMD3Q7Z407 3707 aa8.69□□□□□ -1.02
CDK5RAP3-217ENST00000580287 TIMM17BO60830 172 aa8.68□□□□□ -1.02
CDK5RAP3-217ENST00000580287 GHRHP01286 108 aa8.68□□□□□ -1.02
CDK5RAP3-217ENST00000580287 XCL1P47992 114 aa8.68□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LYSTQ99698 3801 aa8.68□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
CDK5RAP3-217ENST00000580287 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
CDK5RAP3-217ENST00000580287 OXTP01178 125 aa8.67□□□□□ -1.02
CDK5RAP3-217ENST00000580287 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
CDK5RAP3-217ENST00000580287 ESRGQ1W209 222 aa8.66□□□□□ -1.02
CDK5RAP3-217ENST00000580287 IGHV3OR16-9A0A0B4J2B5 98 aa8.66□□□□□ -1.02
CDK5RAP3-217ENST00000580287 SS18Q15532 418 aa8.65□□□□□ -1.02
CDK5RAP3-217ENST00000580287 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.02
CDK5RAP3-217ENST00000580287 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.03
CDK5RAP3-217ENST00000580287 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 J3QL48 77 aa8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 ANGP03950 147 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 LINC01561Q8N1V8 128 aa8.64□□□□□ -1.03
CDK5RAP3-217ENST00000580287 A0A087WZ39 114 aa8.63□□□□□ -1.03
CDK5RAP3-217ENST00000580287 LINC00158P58513 81 aa8.63□□□□□ -1.03
CDK5RAP3-217ENST00000580287 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
CDK5RAP3-217ENST00000580287 PFN2P35080 140 aa8.63□□□□□ -1.03
CDK5RAP3-217ENST00000580287 LELP1Q5T871 98 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms