RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ANAPC11Q9NYG5 84 aa5.3□□□□□ -1.56
GGA3-207ENST00000578896 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
GGA3-207ENST00000578896 A0A087X002 238 aa5.29□□□□□ -1.56
GGA3-207ENST00000578896 GAGE10A6NGK3 116 aa5.29□□□□□ -1.56
GGA3-207ENST00000578896 RAB5BP61020 215 aa5.29□□□□□ -1.56
GGA3-207ENST00000578896 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
GGA3-207ENST00000578896 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
GGA3-207ENST00000578896 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
GGA3-207ENST00000578896 F8VRH5 84 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 NUPR1O60356 82 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 SCO1O75880 301 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
GGA3-207ENST00000578896 HERVK_113P63121 156 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 LBHQ53QV2 105 aaPredicted RBP5.28□□□□□ -1.56
GGA3-207ENST00000578896 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
GGA3-207ENST00000578896 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 SCGB3A1Q96QR1 104 aa5.28□□□□□ -1.56
GGA3-207ENST00000578896 NXT2Q9NPJ8 142 aaKnown RBP5.28□□□□□ -1.56
GGA3-207ENST00000578896 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
GGA3-207ENST00000578896 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
GGA3-207ENST00000578896 PNRC1Q12796 327 aaPredicted RBP5.27□□□□□ -1.57
GGA3-207ENST00000578896 TOMM6Q96B49 74 aa5.27□□□□□ -1.57
GGA3-207ENST00000578896 TIMM17AQ99595 171 aa5.27□□□□□ -1.57
GGA3-207ENST00000578896 CARHSP1Q9Y2V2 147 aaKnown RBP5.27□□□□□ -1.57
GGA3-207ENST00000578896 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
GGA3-207ENST00000578896 BCE1O60756 84 aa5.26□□□□□ -1.57
GGA3-207ENST00000578896 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
GGA3-207ENST00000578896 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
GGA3-207ENST00000578896 K7EMI3 77 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 NPSP0C0P6 89 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
GGA3-207ENST00000578896 RAB14P61106 215 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 SEC11AP67812 179 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 ERASQ7Z444 233 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
GGA3-207ENST00000578896 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 CRYGAP11844 174 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 KRTAP13-2Q52LG2 175 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 PDZD11Q5EBL8 140 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 CST9LQ9H4G1 147 aa5.24□□□□□ -1.57
GGA3-207ENST00000578896 IGKV2-28A0A075B6P5 120 aa5.23□□□□□ -1.57
GGA3-207ENST00000578896 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
GGA3-207ENST00000578896 IGKV2D-28P01615 120 aa5.23□□□□□ -1.57
GGA3-207ENST00000578896 CXCL5P42830 114 aa5.23□□□□□ -1.57
GGA3-207ENST00000578896 G0S2P27469 103 aa5.22□□□□□ -1.57
GGA3-207ENST00000578896 PFN2P35080 140 aa5.22□□□□□ -1.57
GGA3-207ENST00000578896 UBE2AP49459 152 aa5.22□□□□□ -1.57
GGA3-207ENST00000578896 KRTAP13-1Q8IUC0 172 aa5.22□□□□□ -1.57
GGA3-207ENST00000578896 NKAPP1Q8N9T2 125 aa5.22□□□□□ -1.57
GGA3-207ENST00000578896 TMEM218A2RU14 115 aa5.21□□□□□ -1.58
GGA3-207ENST00000578896 NDUFA6P56556 154 aa5.21□□□□□ -1.58
GGA3-207ENST00000578896 PRLHP81277 87 aa5.21□□□□□ -1.58
GGA3-207ENST00000578896 PMVKQ15126 192 aa5.21□□□□□ -1.58
GGA3-207ENST00000578896 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 LINC01546A6NGU7 62 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 TMEM238C9JI98 176 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 FABP9Q0Z7S8 132 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 CLLU1Q5K131 121 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 FA2HQ7L5A8 372 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 Q8NDZ9 215 aa5.2□□□□□ -1.58
GGA3-207ENST00000578896 ZNF625Q96I27 306 aaPredicted RBP5.2□□□□□ -1.58
GGA3-207ENST00000578896 ATP5LO75964 103 aa5.19□□□□□ -1.58
GGA3-207ENST00000578896 FAM19A1Q7Z5A9 133 aa5.19□□□□□ -1.58
GGA3-207ENST00000578896 GNB1LQ9BYB4 327 aa5.19□□□□□ -1.58
GGA3-207ENST00000578896 MRPL18Q9H0U6 180 aaKnown RBP5.19□□□□□ -1.58
GGA3-207ENST00000578896 SMCO4Q9NRQ5 59 aa5.19□□□□□ -1.58
GGA3-207ENST00000578896 TRAV9-1A0A075B6T8 112 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 A0A096LNJ9 63 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 H3BRM9 83 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 VPREB1P12018 145 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
GGA3-207ENST00000578896 IFITM2Q01629 132 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 LINC00304Q8N9R0 145 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 URB1-AS1Q96HZ7 61 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 SND1-IT1Q9HBX3 110 aa5.18□□□□□ -1.58
GGA3-207ENST00000578896 IGLV5-39A0A0G2JS06 123 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 IGLC3P0DOY3 106 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 S100PP25815 95 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 C3orf22Q8N5N4 141 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 TMEM126AQ9H061 195 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 ERG28Q9UKR5 140 aa5.17□□□□□ -1.58
GGA3-207ENST00000578896 IGKV2D-26A0A0A0MRZ7 120 aa5.16□□□□□ -1.58
GGA3-207ENST00000578896 A0A0U1RRA0 63 aa5.16□□□□□ -1.58
GGA3-207ENST00000578896 M0R378 163 aa5.16□□□□□ -1.58
GGA3-207ENST00000578896 UQCC3Q6UW78 93 aa5.16□□□□□ -1.58
GGA3-207ENST00000578896 IGLV7-46A0A075B6I9 117 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 LINC01549A6NIU2 74 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 C11orf86A6NJI1 115 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 PLEKHB2Q96CS7 222 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 HIGD2AQ9BW72 106 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 SEC11CQ9BY50 192 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 RPS10P5Q9NQ39 176 aa5.15□□□□□ -1.59
GGA3-207ENST00000578896 A0A0U1RQV1 116 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 TMEM170BQ5T4T1 132 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms