RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, human

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBB-208	ENST00000578706	IGHV3-38	A0A0C4DH36	116 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706		A0A0J9YY99	117 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.23	□□□□□ -1.73
UBB-208	ENST00000578706	GAGE12J	A6NER3	117 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	MT1HL1	P0DM35	61 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	FXYD2	P54710	66 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	GAGE4	Q13068	117 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	GAGE5	Q13069	117 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	GAGE13	Q4V321	117 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706		Q6ZUT4	128 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706		Q6ZVH6	145 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	OR5A1	Q8NGJ0	315 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	FAM104A	Q969W3	186 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706	FAM30A	Q9NZY2	134 aa		4.23	□□□□□ -1.73
UBB-208	ENST00000578706		A0A1B0GWB2	263 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706		H3BNG1	76 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	UBE2D1	P51668	147 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	TIRAP	P58753	221 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	TSPEAR-AS2	P59090	65 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
UBB-208	ENST00000578706	FHL2	Q14192	279 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	LELP1	Q5T871	98 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	AMMECR1L	Q6DCA0	310 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	GTF2H5	Q6ZYL4	71 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	FAM19A3	Q7Z5A8	133 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	TMEM243	Q9BU79	118 aa		4.22	□□□□□ -1.73
UBB-208	ENST00000578706	GEMIN7	Q9H840	131 aa	Known RBP	4.22	□□□□□ -1.73
UBB-208	ENST00000578706	NHP2	Q9NX24	153 aa	Known RBP	4.22	□□□□□ -1.73
UBB-208	ENST00000578706	IGLV5-45	A0A087WSX0	123 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	IGHV1-58	A0A0C4DH39	117 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706		A0A1W2PPM0	123 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	TMEM238	C9JI98	176 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706		H3BUT2	72 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	UBE2L6	O14933	153 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	CCL25	O15444	150 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	LINC00694	P0DN24	101 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	FABP2	P12104	132 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	HERVK_113	P63121	156 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	NTM-AS1	Q6ZSK4	140 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	TMEM101	Q96IK0	257 aa		4.21	□□□□□ -1.74
UBB-208	ENST00000578706	IGLV5-52	A0A0A0MRZ9	124 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	GAGE10	A6NGK3	116 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706		K7EP34	96 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	IGHV3-30-3	P0DP02	117 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	SCGB1A1	P11684	91 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	RNASE13	Q5GAN3	156 aa	Known RBP	4.2	□□□□□ -1.74
UBB-208	ENST00000578706	CFAP161	Q6P656	301 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	RAB37	Q96AX2	223 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	VSIG2	Q96IQ7	327 aa		4.2	□□□□□ -1.74
UBB-208	ENST00000578706	TRBV6-8	A0A0A6YYG3	113 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	LOC100131303	A0A0U1RQF7	123 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706		K7ERU9	68 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	IGHV3-30	P01768	117 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	IGHV3-30-5	P0DP03	117 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	NTN5	Q8WTR8	489 aa	Predicted RBP	4.19	□□□□□ -1.74
UBB-208	ENST00000578706	CDC42SE2	Q9NRR3	84 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	PRO0255	Q9UI72	69 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	SPCS1	Q9Y6A9	102 aa		4.19	□□□□□ -1.74
UBB-208	ENST00000578706	IGHV3-64	A0A075B6Q5	118 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706		A0A096LPF7	62 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	IGLV5-39	A0A0G2JS06	123 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706		A0A0J9YXY3	114 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706		K7ERJ3	54 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	LCE2B	O14633	110 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	TIMM17B	O60830	172 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	SPINK8	P0C7L1	97 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	GYPE	P15421	78 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	RPL24	P83731	157 aa	Known RBP	4.18	□□□□□ -1.74
UBB-208	ENST00000578706	LINC00242	Q5T6M2	205 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	C10orf126	Q8N4M7	172 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	ATP6V0E2	Q8NHE4	81 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	SPANXD	Q9BXN6	97 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	SPANXC	Q9NY87	97 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	CDKN2A-AS1	Q9UH64	79 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	NDUFA12	Q9UI09	145 aa		4.18	□□□□□ -1.74
UBB-208	ENST00000578706	LPA	P08519	4548 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	TRAV8-3	A0A0A6YYJ7	113 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.17	□□□□□ -1.74
UBB-208	ENST00000578706	NDUFA1	O15239	70 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	PAX4	O43316	350 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	OCIAD2	Q56VL3	154 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	LYRM7	Q5U5X0	104 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	NAA38	Q9BRA0	125 aa	Known RBP	4.17	□□□□□ -1.74
UBB-208	ENST00000578706	VPS25	Q9BRG1	176 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	CHCHD5	Q9BSY4	110 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	CDIP1	Q9H305	208 aa		4.17	□□□□□ -1.74
UBB-208	ENST00000578706	TRAV13-1	A0A0B4J241	112 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706		A0A0B4J2C4	111 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706		A0A1B0GUV1	79 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	SMIM1	B2RUZ4	78 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	PSCA	O43653	123 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	IFITM1	P13164	125 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	HERV-K104	P63124	156 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	COX6A2	Q02221	97 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	GAGE6	Q13070	117 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	CIRBP	Q14011	172 aa	Known RBP	4.16	□□□□□ -1.74
UBB-208	ENST00000578706	MIA	Q16674	131 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706	LCE2A	Q5TA79	106 aa	Predicted RBP	4.16	□□□□□ -1.74
UBB-208	ENST00000578706	LYPD5	Q6UWN5	251 aa		4.16	□□□□□ -1.74
UBB-208	ENST00000578706		Q6ZSA8	131 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms