RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 MIAQ16674 131 aa11.48□□□□□ -0.57
SREBF1-218ENST00000578469 ENHOQ6UWT2 76 aa11.48□□□□□ -0.57
SREBF1-218ENST00000578469 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
SREBF1-218ENST00000578469 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 K7EP13 123 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 APOMO95445 188 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 RPL24P83731 157 aaKnown RBP11.47□□□□□ -0.57
SREBF1-218ENST00000578469 C6orf226Q5I0X4 101 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
SREBF1-218ENST00000578469 FOXI1Q12951 378 aa11.46□□□□□ -0.57
SREBF1-218ENST00000578469 Q8IZM0 81 aa11.46□□□□□ -0.57
SREBF1-218ENST00000578469 LITAFQ99732 161 aa11.46□□□□□ -0.57
SREBF1-218ENST00000578469 DNAH10OSP0CZ25 163 aa11.45□□□□□ -0.58
SREBF1-218ENST00000578469 IFITM1P13164 125 aa11.45□□□□□ -0.58
SREBF1-218ENST00000578469 MUSTN1Q8IVN3 82 aa11.45□□□□□ -0.58
SREBF1-218ENST00000578469 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
SREBF1-218ENST00000578469 RAB37Q96AX2 223 aa11.45□□□□□ -0.58
SREBF1-218ENST00000578469 A0A1B0GWB2 263 aa11.44□□□□□ -0.58
SREBF1-218ENST00000578469 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
SREBF1-218ENST00000578469 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
SREBF1-218ENST00000578469 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
SREBF1-218ENST00000578469 LINC00588Q9Y4M8 146 aa11.44□□□□□ -0.58
SREBF1-218ENST00000578469 ADAMTSL4-AS1Q5T5F5 129 aa11.43□□□□□ -0.58
SREBF1-218ENST00000578469 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-218ENST00000578469 LY6G6CO95867 125 aa11.42□□□□□ -0.58
SREBF1-218ENST00000578469 CXCL5P42830 114 aa11.42□□□□□ -0.58
SREBF1-218ENST00000578469 K7ERJ3 54 aa11.41□□□□□ -0.58
SREBF1-218ENST00000578469 CKS1BP61024 79 aa11.41□□□□□ -0.58
SREBF1-218ENST00000578469 UPK3BQ9BT76 320 aa11.41□□□□□ -0.58
SREBF1-218ENST00000578469 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-218ENST00000578469 A4D1N5 150 aa11.4□□□□□ -0.58
SREBF1-218ENST00000578469 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
SREBF1-218ENST00000578469 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
SREBF1-218ENST00000578469 FRAS1Q86XX4 4008 aa11.39□□□□□ -0.59
SREBF1-218ENST00000578469 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
SREBF1-218ENST00000578469 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
SREBF1-218ENST00000578469 VAMP3Q15836 100 aa11.39□□□□□ -0.59
SREBF1-218ENST00000578469 H3BUT2 72 aa11.38□□□□□ -0.59
SREBF1-218ENST00000578469 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 CFC1BP0CG36 223 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 CFC1P0CG37 223 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 LINC00158P58513 81 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 NPC2P61916 151 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 SPAG11BQ08648 103 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 APLNQ9ULZ1 77 aa11.37□□□□□ -0.59
SREBF1-218ENST00000578469 DAND5Q8N907 189 aa11.36□□□□□ -0.59
SREBF1-218ENST00000578469 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
SREBF1-218ENST00000578469 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
SREBF1-218ENST00000578469 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
SREBF1-218ENST00000578469 UBE2DNLQ8IWF7 75 aa11.35□□□□□ -0.59
SREBF1-218ENST00000578469 RMI2Q96E14 147 aa11.35□□□□□ -0.59
SREBF1-218ENST00000578469 HERC2O95714 4834 aa11.35□□□□□ -0.59
SREBF1-218ENST00000578469 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
SREBF1-218ENST00000578469 FABP2P12104 132 aa11.34□□□□□ -0.59
SREBF1-218ENST00000578469 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
SREBF1-218ENST00000578469 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
SREBF1-218ENST00000578469 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
SREBF1-218ENST00000578469 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
SREBF1-218ENST00000578469 NAA38Q9BRA0 125 aaKnown RBP11.33□□□□□ -0.6
SREBF1-218ENST00000578469 Q9HAA7 133 aa11.33□□□□□ -0.6
SREBF1-218ENST00000578469 PFN2P35080 140 aa11.32□□□□□ -0.6
SREBF1-218ENST00000578469 COX17Q14061 63 aa11.32□□□□□ -0.6
SREBF1-218ENST00000578469 ZNF561-AS1K7EIQ3 104 aa11.31□□□□□ -0.6
SREBF1-218ENST00000578469 UBE2V1Q13404 147 aa11.31□□□□□ -0.6
SREBF1-218ENST00000578469 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
SREBF1-218ENST00000578469 GAGE10A6NGK3 116 aa11.3□□□□□ -0.6
SREBF1-218ENST00000578469 KMT2AQ03164 3969 aa11.29□□□□□ -0.6
SREBF1-218ENST00000578469 TSPAN13O95857 204 aa11.29□□□□□ -0.6
SREBF1-218ENST00000578469 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
SREBF1-218ENST00000578469 SOSTDC1Q6X4U4 206 aa11.29□□□□□ -0.6
SREBF1-218ENST00000578469 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-218ENST00000578469 F8WDY8 70 aa11.28□□□□□ -0.6
SREBF1-218ENST00000578469 SPCS1Q9Y6A9 102 aa11.28□□□□□ -0.6
SREBF1-218ENST00000578469 K7EP34 96 aa11.27□□□□□ -0.61
SREBF1-218ENST00000578469 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
SREBF1-218ENST00000578469 Q1RN00 199 aa11.27□□□□□ -0.61
SREBF1-218ENST00000578469 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
SREBF1-218ENST00000578469 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
SREBF1-218ENST00000578469 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.61
SREBF1-218ENST00000578469 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
SREBF1-218ENST00000578469 GVQW2A0A096LPI5 108 aaPredicted RBP11.26□□□□□ -0.61
SREBF1-218ENST00000578469 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
SREBF1-218ENST00000578469 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
SREBF1-218ENST00000578469 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
SREBF1-218ENST00000578469 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
SREBF1-218ENST00000578469 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
SREBF1-218ENST00000578469 PSMB2P49721 201 aa11.25□□□□□ -0.61
SREBF1-218ENST00000578469 C15orf56Q8N910 161 aa11.25□□□□□ -0.61
SREBF1-218ENST00000578469 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
SREBF1-218ENST00000578469 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
SREBF1-218ENST00000578469 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
SREBF1-218ENST00000578469 H7C2G1 150 aa11.24□□□□□ -0.61
SREBF1-218ENST00000578469 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
SREBF1-218ENST00000578469 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
SREBF1-218ENST00000578469 RPL13AP40429 203 aaKnown RBP11.23□□□□□ -0.61
SREBF1-218ENST00000578469 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms