RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 SND1-IT1Q9HBX3 110 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 COX7A2LO14548 114 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 HTN3P15516 51 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 APOC4P55056 127 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 DAD1P61803 113 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 IGLV10-54A0A075B6I4 117 aa12.11□□□□□ -0.47
ERBB2-205ENST00000578199 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
ERBB2-205ENST00000578199 SS18Q15532 418 aa12.11□□□□□ -0.47
ERBB2-205ENST00000578199 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
ERBB2-205ENST00000578199 CCL18P55774 89 aa12.1□□□□□ -0.47
ERBB2-205ENST00000578199 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
ERBB2-205ENST00000578199 Q8NAQ8 132 aa12.1□□□□□ -0.47
ERBB2-205ENST00000578199 H3BT86 120 aa12.09□□□□□ -0.47
ERBB2-205ENST00000578199 CCDC179H3BU77 68 aa12.09□□□□□ -0.47
ERBB2-205ENST00000578199 NDUFV3P56181 108 aaKnown RBP12.09□□□□□ -0.47
ERBB2-205ENST00000578199 ANK2Q01484 3957 aa12.09□□□□□ -0.47
ERBB2-205ENST00000578199 IGHV4-30-4P0DP06 118 aa12.08□□□□□ -0.48
ERBB2-205ENST00000578199 CRPP02741 224 aa12.07□□□□□ -0.48
ERBB2-205ENST00000578199 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
ERBB2-205ENST00000578199 IBA57-AS1B1ANH7 110 aa12.07□□□□□ -0.48
ERBB2-205ENST00000578199 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
ERBB2-205ENST00000578199 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
ERBB2-205ENST00000578199 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
ERBB2-205ENST00000578199 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
ERBB2-205ENST00000578199 ATP5G1P05496 136 aa12.06□□□□□ -0.48
ERBB2-205ENST00000578199 TRAV13-2A0A0B4J235 113 aa12.05□□□□□ -0.48
ERBB2-205ENST00000578199 Q9HAA7 133 aa12.04□□□□□ -0.48
ERBB2-205ENST00000578199 PKD1L1Q8TDX9 2849 aa12.04□□□□□ -0.48
ERBB2-205ENST00000578199 MIFP14174 115 aa12.04□□□□□ -0.48
ERBB2-205ENST00000578199 REG3AQ06141 175 aa12.04□□□□□ -0.48
ERBB2-205ENST00000578199 SMIM11BQ8TCY0 68 aa12.04□□□□□ -0.48
ERBB2-205ENST00000578199 CHCHD10Q8WYQ3 142 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-205ENST00000578199 WFDC9Q8NEX5 89 aa12.03□□□□□ -0.48
ERBB2-205ENST00000578199 SNCGO76070 127 aa12.03□□□□□ -0.48
ERBB2-205ENST00000578199 RPL28P46779 137 aaKnown RBP12.03□□□□□ -0.48
ERBB2-205ENST00000578199 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
ERBB2-205ENST00000578199 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.48
ERBB2-205ENST00000578199 TTC32Q5I0X7 151 aa12.02□□□□□ -0.48
ERBB2-205ENST00000578199 Q8IZM0 81 aa12.02□□□□□ -0.48
ERBB2-205ENST00000578199 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.48
ERBB2-205ENST00000578199 PRR3P79522 188 aaKnown RBP12.01□□□□□ -0.49
ERBB2-205ENST00000578199 OR13C6PQ8NH95 151 aa12.01□□□□□ -0.49
ERBB2-205ENST00000578199 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
ERBB2-205ENST00000578199 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
ERBB2-205ENST00000578199 FBN1P35555 2871 aaKnown RBP12□□□□□ -0.49
ERBB2-205ENST00000578199 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
ERBB2-205ENST00000578199 F8P00451 2351 aa12□□□□□ -0.49
ERBB2-205ENST00000578199 KIAA0087Q14695 138 aa12□□□□□ -0.49
ERBB2-205ENST00000578199 Q6Q795 121 aa12□□□□□ -0.49
ERBB2-205ENST00000578199 A0A087WYN8 130 aa11.99□□□□□ -0.49
ERBB2-205ENST00000578199 RETNQ9HD89 108 aa11.99□□□□□ -0.49
ERBB2-205ENST00000578199 TRACP01848 142 aa11.99□□□□□ -0.49
ERBB2-205ENST00000578199 MALP21145 153 aa11.99□□□□□ -0.49
ERBB2-205ENST00000578199 C22orf24Q9Y442 160 aa11.99□□□□□ -0.49
ERBB2-205ENST00000578199 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
ERBB2-205ENST00000578199 LINC00526Q96FQ7 95 aa11.98□□□□□ -0.49
ERBB2-205ENST00000578199 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
ERBB2-205ENST00000578199 FLNBO75369 2602 aaKnown RBP11.97□□□□□ -0.49
ERBB2-205ENST00000578199 DEFB121Q5J5C9 76 aa11.97□□□□□ -0.49
ERBB2-205ENST00000578199 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
ERBB2-205ENST00000578199 KRTAP10-11P60412 298 aa11.96□□□□□ -0.5
ERBB2-205ENST00000578199 C6orf223Q8N319 242 aa11.96□□□□□ -0.5
ERBB2-205ENST00000578199 KLK12Q9UKR0 248 aa11.96□□□□□ -0.5
ERBB2-205ENST00000578199 STAB1Q9NY15 2570 aa11.95□□□□□ -0.5
ERBB2-205ENST00000578199 WIPF1O43516 503 aa11.94□□□□□ -0.5
ERBB2-205ENST00000578199 LELP1Q5T871 98 aa11.94□□□□□ -0.5
ERBB2-205ENST00000578199 C10orf25Q5T742 122 aa11.93□□□□□ -0.5
ERBB2-205ENST00000578199 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
ERBB2-205ENST00000578199 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
ERBB2-205ENST00000578199 LECT2O14960 151 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 SLPIP03973 132 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 Q8NDZ9 215 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
ERBB2-205ENST00000578199 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
ERBB2-205ENST00000578199 DNAL4O96015 105 aa11.9□□□□□ -0.5
ERBB2-205ENST00000578199 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
ERBB2-205ENST00000578199 H0YGX0 51 aa11.88□□□□□ -0.51
ERBB2-205ENST00000578199 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
ERBB2-205ENST00000578199 NCR3O14931 201 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 CXCL5P42830 114 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 Q6ZTC4 211 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 PRR34Q9NV39 138 aa11.87□□□□□ -0.51
ERBB2-205ENST00000578199 COX17Q14061 63 aa11.86□□□□□ -0.51
ERBB2-205ENST00000578199 TMEM126AQ9H061 195 aa11.86□□□□□ -0.51
ERBB2-205ENST00000578199 CYSRT1A8MQ03 144 aa11.86□□□□□ -0.51
ERBB2-205ENST00000578199 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
ERBB2-205ENST00000578199 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
ERBB2-205ENST00000578199 KLK5Q9Y337 293 aaPredicted RBP11.85□□□□□ -0.51
ERBB2-205ENST00000578199 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
ERBB2-205ENST00000578199 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.52
ERBB2-205ENST00000578199 MAST4O15021 2626 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms