RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 WFDC11Q8NEX6 87 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 CREBBPQ92793 2442 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 MXRA5Q9NR99 2828 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 DOPEY2Q9Y3R5 2298 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 IGLV5-39A0A0G2JS06 123 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 M0QY20 66 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 ODF3L2Q3SX64 289 aa4.95□□□□□ -1.62
KRT39-203ENST00000578078 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
KRT39-203ENST00000578078 CD28P10747 220 aa4.94□□□□□ -1.62
KRT39-203ENST00000578078 SNRPD3P62318 126 aaKnown RBP4.94□□□□□ -1.62
KRT39-203ENST00000578078 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
KRT39-203ENST00000578078 Q9HAA7 133 aa4.94□□□□□ -1.62
KRT39-203ENST00000578078 ITPR3Q14573 2671 aa4.94□□□□□ -1.62
KRT39-203ENST00000578078 A0A087WVE0 104 aa4.93□□□□□ -1.62
KRT39-203ENST00000578078 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
KRT39-203ENST00000578078 KLLNB2CW77 178 aa4.93□□□□□ -1.62
KRT39-203ENST00000578078 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
KRT39-203ENST00000578078 IGLV5-52A0A0A0MRZ9 124 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 INAFM1C9JVW0 142 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 F6UB75 175 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 H3BQ85 93 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 CRPP02741 224 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 PRR9Q5T870 116 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 DYNLRB2Q8TF09 96 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 C4orf3Q8WVX3 66 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 FLNBO75369 2602 aaKnown RBP4.92□□□□□ -1.62
KRT39-203ENST00000578078 SETXQ7Z333 2677 aaKnown RBP4.92□□□□□ -1.62
KRT39-203ENST00000578078 IGHV3-64A0A075B6Q5 118 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 TRAV12-3A0A0B4J271 114 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 DNAJC9-AS1A6NH13 148 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 CXCL6P80162 114 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 FAM218AQ96MZ4 157 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
KRT39-203ENST00000578078 K7EQG2 157 aa4.91□□□□□ -1.62
KRT39-203ENST00000578078 PDE6GP18545 87 aa4.91□□□□□ -1.62
KRT39-203ENST00000578078 DEFB1P60022 68 aa4.91□□□□□ -1.62
KRT39-203ENST00000578078 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
KRT39-203ENST00000578078 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
KRT39-203ENST00000578078 OPRPNQ99935 248 aaPredicted RBP4.91□□□□□ -1.62
KRT39-203ENST00000578078 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
KRT39-203ENST00000578078 FLNAP21333 2647 aaKnown RBP4.91□□□□□ -1.62
KRT39-203ENST00000578078 PDZD2O15018 2839 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 LYRM9A8MSI8 78 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 DEFB136Q30KP8 78 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 FAM104AQ969W3 186 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 NACAE9PAV3 2078 aa4.9□□□□□ -1.62
KRT39-203ENST00000578078 A0A0U1RQV1 116 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 ESRGQ1W209 222 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
KRT39-203ENST00000578078 NBPF19A0A087WUL8 3843 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 TRBV7-4A0A0J9YYF1 115 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 F8WEM9 126 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 MIFP14174 115 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 C10orf25Q5T742 122 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
KRT39-203ENST00000578078 MAST4O15021 2626 aa4.88□□□□□ -1.63
KRT39-203ENST00000578078 AKAP9Q99996 3911 aa4.88□□□□□ -1.63
KRT39-203ENST00000578078 GNRH2O43555 120 aa4.88□□□□□ -1.63
KRT39-203ENST00000578078 Q1T7F1 81 aa4.88□□□□□ -1.63
KRT39-203ENST00000578078 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 LY6G6DO95868 133 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 IGKV3-20P01619 116 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 ESM1Q9NQ30 184 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
KRT39-203ENST00000578078 ZNF469Q96JG9 3925 aaPredicted RBP4.87□□□□□ -1.63
KRT39-203ENST00000578078 TLN2Q9Y4G6 2542 aa4.87□□□□□ -1.63
KRT39-203ENST00000578078 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 ENHOQ6UWT2 76 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
KRT39-203ENST00000578078 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 UNC79Q9P2D8 2635 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 CCDC168Q8NDH2 2452 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 DEFB131AP59861 70 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 HILS1P60008 231 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 SS18Q15532 418 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 RETNQ9HD89 108 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
KRT39-203ENST00000578078 GCN1Q92616 2671 aaKnown RBP4.85□□□□□ -1.63
KRT39-203ENST00000578078 ITPR2Q14571 2701 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 MUC4Q99102 2169 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 A0A087WYN8 130 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 DEFB114Q30KQ6 69 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 SMIM11BQ8TCY0 68 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 CHCHD7Q9BUK0 85 aa4.85□□□□□ -1.63
KRT39-203ENST00000578078 A8MTW9 85 aa4.84□□□□□ -1.63
KRT39-203ENST00000578078 C9orf66Q5T8R8 295 aa4.84□□□□□ -1.63
KRT39-203ENST00000578078 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.63
KRT39-203ENST00000578078 LINC01006Q8NI28 216 aa4.84□□□□□ -1.63
KRT39-203ENST00000578078 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms