RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
SREBF1-217ENST00000577897 NDUFA1O15239 70 aa9.56□□□□□ -0.88
SREBF1-217ENST00000577897 TIMM17BO60830 172 aa9.56□□□□□ -0.88
SREBF1-217ENST00000577897 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
SREBF1-217ENST00000577897 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 IGKV3OR2-268A0A0C4DH90 116 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 IGLV5-39A0A0G2JS06 123 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
SREBF1-217ENST00000577897 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
SREBF1-217ENST00000577897 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
SREBF1-217ENST00000577897 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
SREBF1-217ENST00000577897 COX6A2Q02221 97 aa9.54□□□□□ -0.88
SREBF1-217ENST00000577897 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
SREBF1-217ENST00000577897 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
SREBF1-217ENST00000577897 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.53□□□□□ -0.88
SREBF1-217ENST00000577897 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
SREBF1-217ENST00000577897 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
SREBF1-217ENST00000577897 IFITM1P13164 125 aa9.53□□□□□ -0.88
SREBF1-217ENST00000577897 FXYD2P54710 66 aa9.53□□□□□ -0.88
SREBF1-217ENST00000577897 VAMP3Q15836 100 aa9.53□□□□□ -0.88
SREBF1-217ENST00000577897 A0A087WZ39 114 aa9.52□□□□□ -0.89
SREBF1-217ENST00000577897 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
SREBF1-217ENST00000577897 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.89
SREBF1-217ENST00000577897 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 CRPP02741 224 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 PRSS2P07478 247 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 REG3AQ06141 175 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 LYRM7Q5U5X0 104 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 Q5VSD8 79 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
SREBF1-217ENST00000577897 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 APOMO95445 188 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 CD164L2Q6UWJ8 174 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 Q9H8V8 135 aa9.5□□□□□ -0.89
SREBF1-217ENST00000577897 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 FABP2P12104 132 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 C10orf126Q8N4M7 172 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 RAB37Q96AX2 223 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 FAT1Q14517 4588 aa9.49□□□□□ -0.89
SREBF1-217ENST00000577897 J3QL48 77 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 COX7A2LO14548 114 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 MALP21145 153 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 CXCL5P42830 114 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 XCL1P47992 114 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 MIAQ16674 131 aa9.48□□□□□ -0.89
SREBF1-217ENST00000577897 H3BUT2 72 aa9.47□□□□□ -0.89
SREBF1-217ENST00000577897 C6orf226Q5I0X4 101 aa9.47□□□□□ -0.89
SREBF1-217ENST00000577897 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
SREBF1-217ENST00000577897 GAGE10A6NGK3 116 aa9.46□□□□□ -0.9
SREBF1-217ENST00000577897 UBE2V1Q13404 147 aa9.46□□□□□ -0.9
SREBF1-217ENST00000577897 CFAP161Q6P656 301 aa9.46□□□□□ -0.9
SREBF1-217ENST00000577897 C5orf38Q86SI9 138 aa9.46□□□□□ -0.9
SREBF1-217ENST00000577897 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
SREBF1-217ENST00000577897 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
SREBF1-217ENST00000577897 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
SREBF1-217ENST00000577897 Q8IZM0 81 aa9.45□□□□□ -0.9
SREBF1-217ENST00000577897 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 A0A1W2PPM0 123 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 CCL18P55774 89 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 CKS1BP61024 79 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
SREBF1-217ENST00000577897 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 KLK12Q9UKR0 248 aa9.44□□□□□ -0.9
SREBF1-217ENST00000577897 IBA57-AS1B1ANH7 110 aa9.43□□□□□ -0.9
SREBF1-217ENST00000577897 PRR34Q9NV39 138 aa9.43□□□□□ -0.9
SREBF1-217ENST00000577897 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
SREBF1-217ENST00000577897 A4D1N5 150 aa9.42□□□□□ -0.9
SREBF1-217ENST00000577897 K7ERJ3 54 aa9.42□□□□□ -0.9
SREBF1-217ENST00000577897 K7EP13 123 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 IGHV3-33P01772 117 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
SREBF1-217ENST00000577897 XGP55808 180 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 ESRGQ1W209 222 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 LITAFQ99732 161 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 ERG28Q9UKR5 140 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 SPCS1Q9Y6A9 102 aa9.41□□□□□ -0.9
SREBF1-217ENST00000577897 K7EP34 96 aa9.4□□□□□ -0.9
SREBF1-217ENST00000577897 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-217ENST00000577897 CFC1BP0CG36 223 aa9.4□□□□□ -0.9
SREBF1-217ENST00000577897 CFC1P0CG37 223 aa9.4□□□□□ -0.9
SREBF1-217ENST00000577897 LINC00158P58513 81 aa9.4□□□□□ -0.9
SREBF1-217ENST00000577897 UBE2WQ96B02 151 aa9.4□□□□□ -0.9
SREBF1-217ENST00000577897 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
SREBF1-217ENST00000577897 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
SREBF1-217ENST00000577897 COX17Q14061 63 aa9.39□□□□□ -0.91
SREBF1-217ENST00000577897 Q1RN00 199 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms