RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GAPVD1Q14C86 1478 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 A0A087WVE0 104 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 LOC285095A0A1B0GVY8 99 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 FAM24AA6NFZ4 105 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 CHD1O14646 1710 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 UBA52P62987 128 aaKnown RBP-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 KRTAP20-1Q3LI63 56 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 GNG8Q9UK08 70 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 CREBBPQ92793 2442 aa-0.34□□□□□ -2.46
TOP2A-202ENST00000577541 KIAA1109Q2LD37 5005 aa-0.35□□□□□ -2.46
TOP2A-202ENST00000577541 PLEKHH2Q8IVE3 1493 aa-0.35□□□□□ -2.46
TOP2A-202ENST00000577541 CHD8Q9HCK8 2581 aa-0.35□□□□□ -2.46
TOP2A-202ENST00000577541 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 NCOA3Q9Y6Q9 1424 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 ATP5EP56381 51 aaPredicted RBP-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 FXYD6Q9H0Q3 95 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 PRO1854Q9UHT4 67 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 TOPAZ1Q8N9V7 1692 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 SLIT1O75093 1534 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 URB1O60287 2271 aaKnown RBP-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 FLGP20930 4061 aaPredicted RBP-0.35□□□□□ -2.47
TOP2A-202ENST00000577541 EIF4G3O43432 1585 aaKnown RBP-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 TRBV7-4A0A0J9YYF1 115 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 CRYM-AS1A6NIL9 109 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 SVBPQ8N300 66 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 FAIMQ9NVQ4 179 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 NUP188Q5SRE5 1749 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 MARF1Q9Y4F3 1742 aaKnown RBP-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 MRC2Q9UBG0 1479 aa-0.36□□□□□ -2.47
TOP2A-202ENST00000577541 ZFYVE16Q7Z3T8 1539 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 XRN1Q8IZH2 1706 aaKnown RBP-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 FMN2Q9NZ56 1722 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 S100A3P33764 101 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 SPRR2BP35325 72 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 SARNPP82979 210 aaKnown RBP-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 TMEM203Q969S6 136 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 DOPEY1Q5JWR5 2465 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 PAPPA2Q9BXP8 1791 aa-0.37□□□□□ -2.47
TOP2A-202ENST00000577541 ACANP16112 2415 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 A0A0G2JND7 137 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 A0A1B0GWA3 101 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 NAP1L6A6NFF2 107 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 MT-ATP8P03928 68 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 TRAPPC2P0DI81 140 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 TRAPPC2BP0DI82 140 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 DEFB105AQ8NG35 78 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 NRXN1Q9ULB1 1477 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
TOP2A-202ENST00000577541 SONP18583 2426 aaKnown RBP-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 DNAJC13O75165 2243 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 COX6CP09669 75 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 SEC11AP67812 179 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 LELP1Q5T871 98 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 APLNQ9ULZ1 77 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 ABCA3Q99758 1704 aa-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 FLNBO75369 2602 aaKnown RBP-0.39□□□□□ -2.47
TOP2A-202ENST00000577541 SVEP1Q4LDE5 3571 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 FAT3Q8TDW7 4589 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 LOC730098B7Z3J9 87 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 WHAMMP3Q1A5X7 153 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 DEFB107AQ8IZN7 70 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 C14orf144Q96I85 54 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 C12orf57Q99622 126 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 HYDINQ4G0P3 5121 aa-0.4□□□□□ -2.47
TOP2A-202ENST00000577541 STAB2Q8WWQ8 2551 aa-0.41□□□□□ -2.47
TOP2A-202ENST00000577541 NF1P21359 2839 aa-0.41□□□□□ -2.47
TOP2A-202ENST00000577541 NKTRP30414 1462 aaKnown RBP-0.41□□□□□ -2.47
TOP2A-202ENST00000577541 KNDC1Q76NI1 1749 aa-0.41□□□□□ -2.47
TOP2A-202ENST00000577541 HERC1Q15751 4861 aa-0.41□□□□□ -2.47
TOP2A-202ENST00000577541 MAPKBP1O60336 1514 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 A0A1B0GU69 56 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 C7orf77A4D0Y5 90 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 TMEM262E9PQX1 116 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 ATP6V1G2-DDX39BF2Z307 99 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 H7BZZ5 65 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 GNGT2O14610 69 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 MPC2O95563 127 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 SAA2P0DJI9 122 aaPredicted RBP-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 GTF2H5Q6ZYL4 71 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 C6orf201Q7Z4U5 140 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 PRO1933Q9H354 126 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 CACFD1Q9UGQ2 172 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 TGP01266 2768 aa-0.41□□□□□ -2.48
TOP2A-202ENST00000577541 TARBP1Q13395 1621 aaKnown RBP-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 ANKRD36BQ8N2N9 1353 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 PRDM15P57071 1507 aaPredicted RBP-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 FAM135AQ9P2D6 1515 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 DNAH6Q9C0G6 4158 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 H3BQ15 152 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 M0R2T5 61 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 H1FX-AS1Q4G0G2 97 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 LINC00846Q9NV44 126 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 SETBP1Q9Y6X0 1596 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 IQSEC2Q5JU85 1478 aa-0.42□□□□□ -2.48
TOP2A-202ENST00000577541 STARD9Q9P2P6 4700 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 CUX1P39880 1505 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms