RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
CIITA-211ENST00000576601 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
CIITA-211ENST00000576601 ZNF861PO60384 105 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 MT-ND4LP03901 98 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
CIITA-211ENST00000576601 KIAA1644Q3SXP7 199 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 CTDSP1Q9GZU7 261 aa8.1□□□□□ -1.11
CIITA-211ENST00000576601 A0A087X002 238 aa8.09□□□□□ -1.11
CIITA-211ENST00000576601 SMIM1B2RUZ4 78 aa8.09□□□□□ -1.11
CIITA-211ENST00000576601 F8VRH5 84 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 TSPAN13O95857 204 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 NPSP0C0P6 89 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 ADCYAP1P18509 176 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 RPL13AP40429 203 aaKnown RBP8.08□□□□□ -1.12
CIITA-211ENST00000576601 HERVK_113P63121 156 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 TIMM17AQ99595 171 aa8.08□□□□□ -1.12
CIITA-211ENST00000576601 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
CIITA-211ENST00000576601 NUPR1O60356 82 aa8.07□□□□□ -1.12
CIITA-211ENST00000576601 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CIITA-211ENST00000576601 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
CIITA-211ENST00000576601 RPL37AP8A6NKH3 93 aa8.06□□□□□ -1.12
CIITA-211ENST00000576601 K7EMI3 77 aa8.06□□□□□ -1.12
CIITA-211ENST00000576601 GAGE10A6NGK3 116 aa8.05□□□□□ -1.12
CIITA-211ENST00000576601 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
CIITA-211ENST00000576601 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
CIITA-211ENST00000576601 CARHSP1Q9Y2V2 147 aaKnown RBP8.05□□□□□ -1.12
CIITA-211ENST00000576601 BCE1O60756 84 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 SCO1O75880 301 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 SPINK8P0C7L1 97 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 SEC11AP67812 179 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
CIITA-211ENST00000576601 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 LINC00167Q96N53 147 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
CIITA-211ENST00000576601 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
CIITA-211ENST00000576601 CXCL5P42830 114 aa8.03□□□□□ -1.12
CIITA-211ENST00000576601 ERASQ7Z444 233 aa8.03□□□□□ -1.12
CIITA-211ENST00000576601 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
CIITA-211ENST00000576601 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
CIITA-211ENST00000576601 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
CIITA-211ENST00000576601 RAB5BP61020 215 aa8.01□□□□□ -1.13
CIITA-211ENST00000576601 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
CIITA-211ENST00000576601 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
CIITA-211ENST00000576601 PDZD11Q5EBL8 140 aa8.01□□□□□ -1.13
CIITA-211ENST00000576601 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
CIITA-211ENST00000576601 LINC01546A6NGU7 62 aa8□□□□□ -1.13
CIITA-211ENST00000576601 RAB14P61106 215 aa8□□□□□ -1.13
CIITA-211ENST00000576601 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
CIITA-211ENST00000576601 CST9LQ9H4G1 147 aa8□□□□□ -1.13
CIITA-211ENST00000576601 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
CIITA-211ENST00000576601 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
CIITA-211ENST00000576601 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
CIITA-211ENST00000576601 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
CIITA-211ENST00000576601 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CIITA-211ENST00000576601 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
CIITA-211ENST00000576601 CRYGAP11844 174 aa7.97□□□□□ -1.13
CIITA-211ENST00000576601 G0S2P27469 103 aa7.97□□□□□ -1.13
CIITA-211ENST00000576601 PRLHP81277 87 aa7.97□□□□□ -1.13
CIITA-211ENST00000576601 Q8NDZ9 215 aa7.97□□□□□ -1.13
CIITA-211ENST00000576601 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 A0A096LNJ9 63 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 UBE2AP49459 152 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 PMVKQ15126 192 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
CIITA-211ENST00000576601 TMEM218A2RU14 115 aa7.95□□□□□ -1.14
CIITA-211ENST00000576601 TMEM238C9JI98 176 aa7.95□□□□□ -1.14
CIITA-211ENST00000576601 PFN2P35080 140 aa7.95□□□□□ -1.14
CIITA-211ENST00000576601 LINC01547P58512 204 aaPredicted RBP7.95□□□□□ -1.14
CIITA-211ENST00000576601 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
CIITA-211ENST00000576601 IGLV5-39A0A0G2JS06 123 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 IGLC3P0DOY3 106 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 VPREB1P12018 145 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 IFITM2Q01629 132 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
CIITA-211ENST00000576601 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
CIITA-211ENST00000576601 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
CIITA-211ENST00000576601 SND1-IT1Q9HBX3 110 aa7.93□□□□□ -1.14
CIITA-211ENST00000576601 ATP5LO75964 103 aa7.92□□□□□ -1.14
CIITA-211ENST00000576601 PMCHL1Q16048 86 aa7.92□□□□□ -1.14
CIITA-211ENST00000576601 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CIITA-211ENST00000576601 SMCO4Q9NRQ5 59 aa7.92□□□□□ -1.14
CIITA-211ENST00000576601 H3BRM9 83 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 S100PP25815 95 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 FABP9Q0Z7S8 132 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 UQCC3Q6UW78 93 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
CIITA-211ENST00000576601 LINC01549A6NIU2 74 aa7.9□□□□□ -1.14
CIITA-211ENST00000576601 M0R378 163 aa7.9□□□□□ -1.14
CIITA-211ENST00000576601 NDUFA6P56556 154 aa7.9□□□□□ -1.14
CIITA-211ENST00000576601 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.14
CIITA-211ENST00000576601 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
CIITA-211ENST00000576601 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms