RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 SPINK14Q6IE38 97 aa5.55□□□□□ -1.52
TOM1L1-220ENST00000575333 LINC01356Q8N9X3 169 aa5.55□□□□□ -1.52
TOM1L1-220ENST00000575333 SPENQ96T58 3664 aaKnown RBP5.55□□□□□ -1.52
TOM1L1-220ENST00000575333 ZFYVE26Q68DK2 2539 aa5.55□□□□□ -1.52
TOM1L1-220ENST00000575333 CCL18P55774 89 aa5.54□□□□□ -1.52
TOM1L1-220ENST00000575333 HIGD2AQ9BW72 106 aa5.54□□□□□ -1.52
TOM1L1-220ENST00000575333 ABCA1O95477 2261 aa5.54□□□□□ -1.52
TOM1L1-220ENST00000575333 ATRXP46100 2492 aa5.54□□□□□ -1.52
TOM1L1-220ENST00000575333 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 IGHV3-23P01764 117 aa5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 IGHV4-31P0DP07 118 aa5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 RNASE13Q5GAN3 156 aaKnown RBP5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
TOM1L1-220ENST00000575333 TLN1Q9Y490 2541 aaKnown RBP5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3OR16-12A0A075B7B8 117 aa5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 K7EQD1 137 aa5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV4-38-2P0DP08 117 aa5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 LINC00467Q9BRT7 94 aa5.52□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV7-81A0A0B4J1V7 117 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3-66A0A0C4DH42 116 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 LINC00158P58513 81 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 COX6A2Q02221 97 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 KIAA0087Q14695 138 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 Q9BRP9 147 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 A0A087X002 238 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 MUC7Q8TAX7 377 aa5.51□□□□□ -1.53
TOM1L1-220ENST00000575333 CFAP46Q8IYW2 2715 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3OR16-8A0A075B7F1 116 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 LRCOL1A6NCL2 159 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 A6NED7 52 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 ZNF843Q8N446 348 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 CNEP1R1Q8N9A8 125 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 CDC42SE2Q9NRR3 84 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 DPM3Q9P2X0 92 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 SPTA1P02549 2419 aa5.5□□□□□ -1.53
TOM1L1-220ENST00000575333 PLCE1Q9P212 2302 aa5.49□□□□□ -1.53
TOM1L1-220ENST00000575333 FAM208BQ5VWN6 2430 aa5.49□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3-35A0A0C4DH35 117 aa5.49□□□□□ -1.53
TOM1L1-220ENST00000575333 PRB1P04280 392 aa5.49□□□□□ -1.53
TOM1L1-220ENST00000575333 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
TOM1L1-220ENST00000575333 SLURP1P55000 103 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 MINOS1Q5TGZ0 78 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3-49A0A0A0MS15 119 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 C9orf116Q5BN46 136 aaPredicted RBP5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
TOM1L1-220ENST00000575333 ODF3BA8MYP8 253 aa5.47□□□□□ -1.53
TOM1L1-220ENST00000575333 ZFHX3Q15911 3703 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3OR16-13A0A075B7E8 117 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 IGHV3-74A0A0B4J1X5 117 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 A8MU10 97 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 NDUFA4O00483 81 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 COX7A1P24310 79 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 COX7BP24311 80 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 MP68P56378 58 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 LYPD2Q6UXB3 125 aa5.46□□□□□ -1.53
TOM1L1-220ENST00000575333 COL6A6A6NMZ7 2263 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 DNAJC13O75165 2243 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 A0A096LNT2 108 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 A0A1B0GW54 56 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 PRM2P04554 102 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 B9D2Q9BPU9 175 aa5.46□□□□□ -1.54
TOM1L1-220ENST00000575333 IGHV3-53P01767 116 aa5.45□□□□□ -1.54
TOM1L1-220ENST00000575333 LINC00313P59037 77 aa5.45□□□□□ -1.54
TOM1L1-220ENST00000575333 RELNP78509 3460 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 ZNF462Q96JM2 2506 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 C3orf84H3BNL1 204 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 CASC2Q6XLA1 102 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 SCXQ7RTU7 201 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 M0R2N4 97 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 NANOS2P60321 138 aaKnown RBP5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 MOBPQ13875 183 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 CELA1Q9UNI1 258 aa5.44□□□□□ -1.54
TOM1L1-220ENST00000575333 RP1L1Q8IWN7 2480 aaPredicted RBP5.43□□□□□ -1.54
TOM1L1-220ENST00000575333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.43□□□□□ -1.54
TOM1L1-220ENST00000575333 NBASA2RRP1 2371 aa5.43□□□□□ -1.54
TOM1L1-220ENST00000575333 IGLV4-60A0A075B6I1 120 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 H3BPC8 53 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 LMO4P61968 165 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 LINC01006Q8NI28 216 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 MINOS1-NBL1R4GNA1 71 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 C19orf84I3L1E1 186 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 COX17Q14061 63 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 C6orf99Q4VX62 202 aa5.41□□□□□ -1.54
TOM1L1-220ENST00000575333 MYO18BQ8IUG5 2567 aa5.4□□□□□ -1.54
TOM1L1-220ENST00000575333 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
TOM1L1-220ENST00000575333 Q8N9W7 124 aa5.4□□□□□ -1.54
TOM1L1-220ENST00000575333 TOMM7Q9P0U1 55 aa5.4□□□□□ -1.54
TOM1L1-220ENST00000575333 FLNCQ14315 2725 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms