RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 HERVK_113P63121 156 aa5.36□□□□□ -1.55
SMG6-216ENST00000575176 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
SMG6-216ENST00000575176 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
SMG6-216ENST00000575176 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 COLCA2A8K830 154 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 HBDP02042 147 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 LINC00614P0C842 121 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 RPL18AQ02543 176 aaKnown RBP5.35□□□□□ -1.55
SMG6-216ENST00000575176 GAGE2BQ13066 116 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 PMVKQ15126 192 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
SMG6-216ENST00000575176 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
SMG6-216ENST00000575176 ZNF22P17026 224 aaPredicted RBP5.34□□□□□ -1.55
SMG6-216ENST00000575176 SRSF9Q13242 221 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMG6-216ENST00000575176 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
SMG6-216ENST00000575176 PKIGQ9Y2B9 76 aa5.34□□□□□ -1.55
SMG6-216ENST00000575176 C11orf86A6NJI1 115 aa5.33□□□□□ -1.56
SMG6-216ENST00000575176 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
SMG6-216ENST00000575176 OXTP01178 125 aa5.33□□□□□ -1.56
SMG6-216ENST00000575176 G0S2P27469 103 aa5.33□□□□□ -1.56
SMG6-216ENST00000575176 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
SMG6-216ENST00000575176 SMCO4Q9NRQ5 59 aa5.33□□□□□ -1.56
SMG6-216ENST00000575176 TRGC2P03986 189 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 SEC11AP67812 179 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 PSORS1C2Q9UIG4 136 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 LRP2P98164 4655 aa5.32□□□□□ -1.56
SMG6-216ENST00000575176 F8VRH5 84 aa5.31□□□□□ -1.56
SMG6-216ENST00000575176 NUPR1O60356 82 aa5.31□□□□□ -1.56
SMG6-216ENST00000575176 SCO1O75880 301 aa5.31□□□□□ -1.56
SMG6-216ENST00000575176 ODF1Q14990 250 aa5.31□□□□□ -1.56
SMG6-216ENST00000575176 C7orf33Q8WU49 177 aa5.31□□□□□ -1.56
SMG6-216ENST00000575176 CHCHD1Q96BP2 118 aaKnown RBP5.31□□□□□ -1.56
SMG6-216ENST00000575176 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
SMG6-216ENST00000575176 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
SMG6-216ENST00000575176 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
SMG6-216ENST00000575176 Q8NDZ9 215 aa5.3□□□□□ -1.56
SMG6-216ENST00000575176 COX7B2Q8TF08 81 aa5.3□□□□□ -1.56
SMG6-216ENST00000575176 TOMM7Q9P0U1 55 aa5.3□□□□□ -1.56
SMG6-216ENST00000575176 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
SMG6-216ENST00000575176 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
SMG6-216ENST00000575176 SERF1AO75920 110 aa5.29□□□□□ -1.56
SMG6-216ENST00000575176 CXCL5P42830 114 aa5.29□□□□□ -1.56
SMG6-216ENST00000575176 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
SMG6-216ENST00000575176 ZNF625Q96I27 306 aaPredicted RBP5.29□□□□□ -1.56
SMG6-216ENST00000575176 M0QXV9 152 aa5.28□□□□□ -1.56
SMG6-216ENST00000575176 ATP5LO75964 103 aa5.28□□□□□ -1.56
SMG6-216ENST00000575176 RAB5BP61020 215 aa5.28□□□□□ -1.56
SMG6-216ENST00000575176 LINC01600Q96MT4 127 aa5.28□□□□□ -1.56
SMG6-216ENST00000575176 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
SMG6-216ENST00000575176 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 PRSS2P07478 247 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 C6orf226Q5I0X4 101 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 BAGE3Q86Y29 109 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 DPH3Q96FX2 82 aa5.27□□□□□ -1.57
SMG6-216ENST00000575176 PACRGQ96M98 296 aaPredicted RBP5.27□□□□□ -1.57
SMG6-216ENST00000575176 J3QL48 77 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 CKS1BP61024 79 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 PLA2G2DQ9UNK4 145 aa5.26□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BKO60814 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BJP06899 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BOP23527 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BBP33778 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BDP58876 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BCP62807 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST2H2BEQ16778 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.25□□□□□ -1.57
SMG6-216ENST00000575176 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BHQ93079 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BNQ99877 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 HIST1H2BMQ99879 126 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 CHTOPQ9Y3Y2 248 aaKnown RBP5.25□□□□□ -1.57
SMG6-216ENST00000575176 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 LPAP08519 4548 aa5.25□□□□□ -1.57
SMG6-216ENST00000575176 H3BRM9 83 aa5.24□□□□□ -1.57
SMG6-216ENST00000575176 HSBP1O75506 76 aa5.24□□□□□ -1.57
SMG6-216ENST00000575176 VPREB1P12018 145 aa5.24□□□□□ -1.57
SMG6-216ENST00000575176 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
SMG6-216ENST00000575176 NDUFA6P56556 154 aa5.23□□□□□ -1.57
SMG6-216ENST00000575176 ERG28Q9UKR5 140 aa5.23□□□□□ -1.57
SMG6-216ENST00000575176 H0Y9J4 135 aa5.22□□□□□ -1.57
SMG6-216ENST00000575176 TMEM170BQ5T4T1 132 aa5.22□□□□□ -1.57
SMG6-216ENST00000575176 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
SMG6-216ENST00000575176 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
SMG6-216ENST00000575176 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
SMG6-216ENST00000575176 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
SMG6-216ENST00000575176 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
SMG6-216ENST00000575176 PFN2P35080 140 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms