RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
SMPD3-212ENST00000574662 LOC100131303A0A0U1RQF7 123 aa11.07□□□□□ -0.64
SMPD3-212ENST00000574662 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
SMPD3-212ENST00000574662 TRBV6-4A0A1B0GX49 114 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 LST1O00453 97 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 NPC2P61916 151 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 Q9H8V8 135 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
SMPD3-212ENST00000574662 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 HERV-K104P63124 156 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 COX6A2Q02221 97 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 TRAV26-1A0A087WT03 109 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
SMPD3-212ENST00000574662 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
SMPD3-212ENST00000574662 H7C423 109 aa11.04□□□□□ -0.64
SMPD3-212ENST00000574662 PAX4O43316 350 aa11.04□□□□□ -0.64
SMPD3-212ENST00000574662 LINC00694P0DN24 101 aa11.04□□□□□ -0.64
SMPD3-212ENST00000574662 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
SMPD3-212ENST00000574662 UBE2L6O14933 153 aa11.03□□□□□ -0.64
SMPD3-212ENST00000574662 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
SMPD3-212ENST00000574662 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
SMPD3-212ENST00000574662 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
SMPD3-212ENST00000574662 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
SMPD3-212ENST00000574662 GYPEP15421 78 aa11.02□□□□□ -0.65
SMPD3-212ENST00000574662 GAGE4Q13068 117 aa11.02□□□□□ -0.65
SMPD3-212ENST00000574662 GAGE5Q13069 117 aa11.02□□□□□ -0.65
SMPD3-212ENST00000574662 TRAV13-1A0A0B4J241 112 aa11.01□□□□□ -0.65
SMPD3-212ENST00000574662 SNCGO76070 127 aa11.01□□□□□ -0.65
SMPD3-212ENST00000574662 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
SMPD3-212ENST00000574662 DAND5Q8N907 189 aa11.01□□□□□ -0.65
SMPD3-212ENST00000574662 ZNF625Q96I27 306 aaPredicted RBP11.01□□□□□ -0.65
SMPD3-212ENST00000574662 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
SMPD3-212ENST00000574662 TEX49A0A1B0GTD5 131 aa11□□□□□ -0.65
SMPD3-212ENST00000574662 CLEC2BQ92478 149 aa11□□□□□ -0.65
SMPD3-212ENST00000574662 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
SMPD3-212ENST00000574662 FAM240AA0A1B0GVK7 77 aa10.99□□□□□ -0.65
SMPD3-212ENST00000574662 COX7A2LO14548 114 aa10.99□□□□□ -0.65
SMPD3-212ENST00000574662 CSMD3Q7Z407 3707 aa10.98□□□□□ -0.65
SMPD3-212ENST00000574662 A0A096LPF7 62 aa10.98□□□□□ -0.65
SMPD3-212ENST00000574662 Q6Q795 121 aa10.98□□□□□ -0.65
SMPD3-212ENST00000574662 H3BNG1 76 aa10.97□□□□□ -0.65
SMPD3-212ENST00000574662 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
SMPD3-212ENST00000574662 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
SMPD3-212ENST00000574662 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
SMPD3-212ENST00000574662 SOSTDC1Q6X4U4 206 aa10.95□□□□□ -0.66
SMPD3-212ENST00000574662 GAGE2DQ9UEU5 116 aa10.95□□□□□ -0.66
SMPD3-212ENST00000574662 TRACP01848 142 aa10.94□□□□□ -0.66
SMPD3-212ENST00000574662 ANAPC13Q9BS18 74 aa10.94□□□□□ -0.66
SMPD3-212ENST00000574662 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
SMPD3-212ENST00000574662 WWC2-AS2Q96NR7 200 aa10.93□□□□□ -0.66
SMPD3-212ENST00000574662 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
SMPD3-212ENST00000574662 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
SMPD3-212ENST00000574662 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
SMPD3-212ENST00000574662 ACYP1P07311 99 aa10.91□□□□□ -0.66
SMPD3-212ENST00000574662 MUC7Q8TAX7 377 aa10.91□□□□□ -0.66
SMPD3-212ENST00000574662 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 NUPR2A6NF83 97 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 CRPP02741 224 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 STARD9Q9P2P6 4700 aa10.9□□□□□ -0.66
SMPD3-212ENST00000574662 GAGE6Q13070 117 aa10.9□□□□□ -0.67
SMPD3-212ENST00000574662 ESRGQ1W209 222 aa10.89□□□□□ -0.67
SMPD3-212ENST00000574662 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
SMPD3-212ENST00000574662 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
SMPD3-212ENST00000574662 TTC32Q5I0X7 151 aa10.88□□□□□ -0.67
SMPD3-212ENST00000574662 KLK5Q9Y337 293 aaPredicted RBP10.88□□□□□ -0.67
SMPD3-212ENST00000574662 NDUFV3P56181 108 aaKnown RBP10.87□□□□□ -0.67
SMPD3-212ENST00000574662 CHCHD5Q9BSY4 110 aa10.87□□□□□ -0.67
SMPD3-212ENST00000574662 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
SMPD3-212ENST00000574662 MIR7-3HGQ8N6C7 128 aa10.86□□□□□ -0.67
SMPD3-212ENST00000574662 TENM2Q9NT68 2774 aa10.86□□□□□ -0.67
SMPD3-212ENST00000574662 A0A087WZ39 114 aa10.85□□□□□ -0.67
SMPD3-212ENST00000574662 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
SMPD3-212ENST00000574662 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
SMPD3-212ENST00000574662 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
SMPD3-212ENST00000574662 IGLV4-60A0A075B6I1 120 aa10.84□□□□□ -0.67
SMPD3-212ENST00000574662 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
SMPD3-212ENST00000574662 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
SMPD3-212ENST00000574662 LELP1Q5T871 98 aa10.83□□□□□ -0.68
SMPD3-212ENST00000574662 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
SMPD3-212ENST00000574662 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
SMPD3-212ENST00000574662 BAALC-AS2P0C853 105 aa10.82□□□□□ -0.68
SMPD3-212ENST00000574662 LINC00158P58513 81 aa10.82□□□□□ -0.68
SMPD3-212ENST00000574662 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
SMPD3-212ENST00000574662 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
SMPD3-212ENST00000574662 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
SMPD3-212ENST00000574662 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 LINC00959A0A1B0GUT2 108 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 H0YGX0 51 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 IMUPQ9GZP8 106 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 LYSTQ99698 3801 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 C3orf84H3BNL1 204 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 CCL18P55774 89 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 Q8N3U1 123 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 FAM218AQ96MZ4 157 aa10.8□□□□□ -0.68
SMPD3-212ENST00000574662 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms