RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 FABP2P12104 132 aa19.23■□□□□ 0.67
CTDNEP1-210ENST00000574322 LINC01556Q5JQF7 62 aa19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 MEIG1Q5JSS6 88 aa19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 COPS9Q8WXC6 57 aa19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 EIF4EBP3O60516 100 aaPredicted RBP19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 PGPEP1Q9NXJ5 209 aa19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 PRO1854Q9UHT4 67 aa19.22■□□□□ 0.67
CTDNEP1-210ENST00000574322 C6orf226Q5I0X4 101 aa19.21■□□□□ 0.67
CTDNEP1-210ENST00000574322 KIAA0087Q14695 138 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 LINC00308Q8TCZ7 52 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 IBA57-AS1B1ANH7 110 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 K7EP34 96 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 CRPP02741 224 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 GTF2H5Q6ZYL4 71 aa19.2■□□□□ 0.66
CTDNEP1-210ENST00000574322 GAGE12HA6NDE8 117 aa19.19■□□□□ 0.66
CTDNEP1-210ENST00000574322 GAGE10A6NGK3 116 aa19.19■□□□□ 0.66
CTDNEP1-210ENST00000574322 DAND5Q8N907 189 aa19.19■□□□□ 0.66
CTDNEP1-210ENST00000574322 KLK5Q9Y337 293 aaPredicted RBP19.18■□□□□ 0.66
CTDNEP1-210ENST00000574322 TSPAN13O95857 204 aa19.17■□□□□ 0.66
CTDNEP1-210ENST00000574322 MALP21145 153 aa19.17■□□□□ 0.66
CTDNEP1-210ENST00000574322 UBE2WQ96B02 151 aa19.17■□□□□ 0.66
CTDNEP1-210ENST00000574322 CXCL5P42830 114 aa19.17■□□□□ 0.66
CTDNEP1-210ENST00000574322 DNAH10OSP0CZ25 163 aa19.16■□□□□ 0.66
CTDNEP1-210ENST00000574322 SPCS1Q9Y6A9 102 aa19.16■□□□□ 0.66
CTDNEP1-210ENST00000574322 NPC2P61916 151 aa19.14■□□□□ 0.65
CTDNEP1-210ENST00000574322 A0A0U1RRA0 63 aa19.13■□□□□ 0.65
CTDNEP1-210ENST00000574322 SOSTDC1Q6X4U4 206 aa19.13■□□□□ 0.65
CTDNEP1-210ENST00000574322 WWC2-AS2Q96NR7 200 aa19.12■□□□□ 0.65
CTDNEP1-210ENST00000574322 KRTAP26-1Q6PEX3 210 aa19.11■□□□□ 0.65
CTDNEP1-210ENST00000574322 LINC00588Q9Y4M8 146 aa19.11■□□□□ 0.65
CTDNEP1-210ENST00000574322 CFAP161Q6P656 301 aa19.11■□□□□ 0.65
CTDNEP1-210ENST00000574322 CKS1BP61024 79 aa19.1■□□□□ 0.65
CTDNEP1-210ENST00000574322 ERG28Q9UKR5 140 aa19.1■□□□□ 0.65
CTDNEP1-210ENST00000574322 CCL18P55774 89 aa19.09■□□□□ 0.65
CTDNEP1-210ENST00000574322 MIR7-3HGQ8N6C7 128 aa19.09■□□□□ 0.65
CTDNEP1-210ENST00000574322 LINC00158P58513 81 aa19.08■□□□□ 0.64
CTDNEP1-210ENST00000574322 C2orf82Q6UX34 121 aa19.08■□□□□ 0.64
CTDNEP1-210ENST00000574322 UPK3BQ9BT76 320 aa19.06■□□□□ 0.64
CTDNEP1-210ENST00000574322 COX17Q14061 63 aa19.05■□□□□ 0.64
CTDNEP1-210ENST00000574322 LYRM7Q5U5X0 104 aa19.05■□□□□ 0.64
CTDNEP1-210ENST00000574322 SPAG11BQ08648 103 aa19.03■□□□□ 0.64
CTDNEP1-210ENST00000574322 MUC7Q8TAX7 377 aa19.02■□□□□ 0.63
CTDNEP1-210ENST00000574322 PFN2P35080 140 aa19.01■□□□□ 0.63
CTDNEP1-210ENST00000574322 C1orf43Q9BWL3 253 aa19■□□□□ 0.63
CTDNEP1-210ENST00000574322 LOC107984156A0A0G2JMH3 177 aa19■□□□□ 0.63
CTDNEP1-210ENST00000574322 ARL17AQ8IVW1 177 aa19■□□□□ 0.63
CTDNEP1-210ENST00000574322 TRBV30A0A0K0K1B3 111 aa18.99■□□□□ 0.63
CTDNEP1-210ENST00000574322 DNAH7Q8WXX0 4024 aa18.98■□□□□ 0.63
CTDNEP1-210ENST00000574322 NTN5Q8WTR8 489 aaPredicted RBP18.97■□□□□ 0.63
CTDNEP1-210ENST00000574322 TRBV20-1A0A075B6N2 111 aa18.96■□□□□ 0.63
CTDNEP1-210ENST00000574322 GVQW2A0A096LPI5 108 aaPredicted RBP18.96■□□□□ 0.63
CTDNEP1-210ENST00000574322 H7C2G1 150 aa18.95■□□□□ 0.62
CTDNEP1-210ENST00000574322 SND1-IT1Q9HBX3 110 aa18.95■□□□□ 0.62
CTDNEP1-210ENST00000574322 RPL13AP40429 203 aaKnown RBP18.94■□□□□ 0.62
CTDNEP1-210ENST00000574322 Q1RN00 199 aa18.94■□□□□ 0.62
CTDNEP1-210ENST00000574322 C6orf223Q8N319 242 aa18.94■□□□□ 0.62
CTDNEP1-210ENST00000574322 UNQ6190/PRO20217Q6UXQ8 127 aa18.94■□□□□ 0.62
CTDNEP1-210ENST00000574322 APLNQ9ULZ1 77 aa18.94■□□□□ 0.62
CTDNEP1-210ENST00000574322 NUPR2A6NF83 97 aa18.93■□□□□ 0.62
CTDNEP1-210ENST00000574322 PSMB2P49721 201 aa18.93■□□□□ 0.62
CTDNEP1-210ENST00000574322 H3BMG7 143 aa18.92■□□□□ 0.62
CTDNEP1-210ENST00000574322 C10orf25Q5T742 122 aa18.92■□□□□ 0.62
CTDNEP1-210ENST00000574322 IGKV2D-24A0A075B6R9 120 aa18.91■□□□□ 0.62
CTDNEP1-210ENST00000574322 SCGB1C2P0DMR2 95 aa18.91■□□□□ 0.62
CTDNEP1-210ENST00000574322 C15orf56Q8N910 161 aa18.91■□□□□ 0.62
CTDNEP1-210ENST00000574322 TRAV13-2A0A0B4J235 113 aa18.9■□□□□ 0.62
CTDNEP1-210ENST00000574322 TRIAP1O43715 76 aa18.9■□□□□ 0.62
CTDNEP1-210ENST00000574322 DYNC2H1Q8NCM8 4307 aaKnown RBP18.89■□□□□ 0.62
CTDNEP1-210ENST00000574322 IGKV2-28A0A075B6P5 120 aa18.89■□□□□ 0.61
CTDNEP1-210ENST00000574322 IGKV2D-28P01615 120 aa18.89■□□□□ 0.61
CTDNEP1-210ENST00000574322 F8WDY8 70 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 C3orf84H3BNL1 204 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 TCL1BO95988 128 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 LINC00526Q96FQ7 95 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 C2orf48Q96LS8 159 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 F8W1H4 67 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 ZNF561-AS1K7EIQ3 104 aa18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 C9orf116Q5BN46 136 aaPredicted RBP18.88■□□□□ 0.61
CTDNEP1-210ENST00000574322 CSMD3Q7Z407 3707 aa18.86■□□□□ 0.61
CTDNEP1-210ENST00000574322 COX6CP09669 75 aa18.85■□□□□ 0.61
CTDNEP1-210ENST00000574322 LINC00337Q8N6G1 96 aa18.85■□□□□ 0.61
CTDNEP1-210ENST00000574322 Q9HAA7 133 aa18.85■□□□□ 0.61
CTDNEP1-210ENST00000574322 PRO0461Q9UI25 63 aa18.85■□□□□ 0.61
CTDNEP1-210ENST00000574322 NDUFC2O95298 119 aa18.84■□□□□ 0.61
CTDNEP1-210ENST00000574322 CASC10Q5T4H9 136 aa18.84■□□□□ 0.61
CTDNEP1-210ENST00000574322 RMI2Q96E14 147 aa18.84■□□□□ 0.61
CTDNEP1-210ENST00000574322 C6orf48Q9UBA6 75 aa18.84■□□□□ 0.61
CTDNEP1-210ENST00000574322 STARD9Q9P2P6 4700 aa18.82■□□□□ 0.6
CTDNEP1-210ENST00000574322 HIGD2BQ4VC39 106 aa18.82■□□□□ 0.6
CTDNEP1-210ENST00000574322 CAMK2N2Q96S95 79 aa18.8■□□□□ 0.6
CTDNEP1-210ENST00000574322 ATXN8Q156A1 80 aa18.77■□□□□ 0.6
CTDNEP1-210ENST00000574322 RPL28P46779 137 aaKnown RBP18.77■□□□□ 0.59
CTDNEP1-210ENST00000574322 DNAH1Q9P2D7 4330 aa18.76■□□□□ 0.59
CTDNEP1-210ENST00000574322 Q6ZRU5 148 aa18.74■□□□□ 0.59
CTDNEP1-210ENST00000574322 WFDC2Q14508 124 aa18.74■□□□□ 0.59
CTDNEP1-210ENST00000574322 UBE2DNLQ8IWF7 75 aa18.74■□□□□ 0.59
CTDNEP1-210ENST00000574322 PLECQ15149 4684 aaKnown RBP18.71■□□□□ 0.59
CTDNEP1-210ENST00000574322 LST1O00453 97 aa18.7■□□□□ 0.58
CTDNEP1-210ENST00000574322 SMCPP49901 116 aaPredicted RBP18.7■□□□□ 0.58
CTDNEP1-210ENST00000574322 SYCNQ0VAF6 134 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms