RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 HERVK_113P63121 156 aa10.6□□□□□ -0.71
SMG6-214ENST00000573827 IGLV5-45A0A087WSX0 123 aa10.59□□□□□ -0.71
SMG6-214ENST00000573827 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
SMG6-214ENST00000573827 PAPPA-AS1Q5QFB9 102 aa10.59□□□□□ -0.71
SMG6-214ENST00000573827 SEC11AP67812 179 aa10.58□□□□□ -0.72
SMG6-214ENST00000573827 PACRGQ96M98 296 aaPredicted RBP10.58□□□□□ -0.72
SMG6-214ENST00000573827 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
SMG6-214ENST00000573827 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
SMG6-214ENST00000573827 S100PP25815 95 aa10.57□□□□□ -0.72
SMG6-214ENST00000573827 TOMM7Q9P0U1 55 aa10.57□□□□□ -0.72
SMG6-214ENST00000573827 M0QXV9 152 aa10.56□□□□□ -0.72
SMG6-214ENST00000573827 RHEBQ15382 184 aa10.56□□□□□ -0.72
SMG6-214ENST00000573827 COX19Q49B96 90 aa10.56□□□□□ -0.72
SMG6-214ENST00000573827 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
SMG6-214ENST00000573827 MRPL18Q9H0U6 180 aaKnown RBP10.56□□□□□ -0.72
SMG6-214ENST00000573827 CST9LQ9H4G1 147 aa10.56□□□□□ -0.72
SMG6-214ENST00000573827 LPAP08519 4548 aa10.55□□□□□ -0.72
SMG6-214ENST00000573827 A0A096LNJ9 63 aa10.55□□□□□ -0.72
SMG6-214ENST00000573827 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
SMG6-214ENST00000573827 PRSS2P07478 247 aa10.55□□□□□ -0.72
SMG6-214ENST00000573827 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
SMG6-214ENST00000573827 GEMIN7Q9H840 131 aaKnown RBP10.55□□□□□ -0.72
SMG6-214ENST00000573827 F8VRH5 84 aa10.54□□□□□ -0.72
SMG6-214ENST00000573827 CKS1BP61024 79 aa10.54□□□□□ -0.72
SMG6-214ENST00000573827 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 H0Y9J4 135 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 KRTAP1-4P0C5Y4 121 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 LINC00469Q8N7U9 141 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
SMG6-214ENST00000573827 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
SMG6-214ENST00000573827 DIRC1Q969H9 104 aa10.52□□□□□ -0.73
SMG6-214ENST00000573827 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.73
SMG6-214ENST00000573827 CXCL5P42830 114 aa10.5□□□□□ -0.73
SMG6-214ENST00000573827 PMVKQ15126 192 aa10.5□□□□□ -0.73
SMG6-214ENST00000573827 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
SMG6-214ENST00000573827 C22orf24Q9Y442 160 aa10.5□□□□□ -0.73
SMG6-214ENST00000573827 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
SMG6-214ENST00000573827 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
SMG6-214ENST00000573827 COX7B2Q8TF08 81 aa10.49□□□□□ -0.73
SMG6-214ENST00000573827 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
SMG6-214ENST00000573827 UBE2BP63146 152 aa10.48□□□□□ -0.73
SMG6-214ENST00000573827 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
SMG6-214ENST00000573827 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
SMG6-214ENST00000573827 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
SMG6-214ENST00000573827 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
SMG6-214ENST00000573827 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.73
SMG6-214ENST00000573827 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
SMG6-214ENST00000573827 LINC00614P0C842 121 aa10.44□□□□□ -0.74
SMG6-214ENST00000573827 ZNF861PO60384 105 aa10.43□□□□□ -0.74
SMG6-214ENST00000573827 APOC3P02656 99 aa10.43□□□□□ -0.74
SMG6-214ENST00000573827 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
SMG6-214ENST00000573827 PMCHL1Q16048 86 aa10.43□□□□□ -0.74
SMG6-214ENST00000573827 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
SMG6-214ENST00000573827 IGLV1-50A0A075B6I6 118 aa10.42□□□□□ -0.74
SMG6-214ENST00000573827 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
SMG6-214ENST00000573827 HBDP02042 147 aa10.42□□□□□ -0.74
SMG6-214ENST00000573827 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
SMG6-214ENST00000573827 NUPR1O60356 82 aa10.41□□□□□ -0.74
SMG6-214ENST00000573827 H3BRM9 83 aa10.4□□□□□ -0.74
SMG6-214ENST00000573827 SVBPQ8N300 66 aa10.4□□□□□ -0.74
SMG6-214ENST00000573827 LINC00167Q96N53 147 aa10.4□□□□□ -0.74
SMG6-214ENST00000573827 SNAPINO95295 136 aa10.39□□□□□ -0.75
SMG6-214ENST00000573827 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
SMG6-214ENST00000573827 RAB5BP61020 215 aa10.38□□□□□ -0.75
SMG6-214ENST00000573827 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
SMG6-214ENST00000573827 BCE1O60756 84 aa10.37□□□□□ -0.75
SMG6-214ENST00000573827 ATP5LO75964 103 aa10.36□□□□□ -0.75
SMG6-214ENST00000573827 NDUFA6P56556 154 aa10.36□□□□□ -0.75
SMG6-214ENST00000573827 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
SMG6-214ENST00000573827 BAGE3Q86Y29 109 aa10.35□□□□□ -0.75
SMG6-214ENST00000573827 Q8NDZ9 215 aa10.35□□□□□ -0.75
SMG6-214ENST00000573827 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
SMG6-214ENST00000573827 SCO1O75880 301 aa10.34□□□□□ -0.75
SMG6-214ENST00000573827 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
SMG6-214ENST00000573827 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
SMG6-214ENST00000573827 VPREB1P12018 145 aa10.33□□□□□ -0.76
SMG6-214ENST00000573827 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
SMG6-214ENST00000573827 ERG28Q9UKR5 140 aa10.33□□□□□ -0.76
SMG6-214ENST00000573827 PFN2P35080 140 aa10.32□□□□□ -0.76
SMG6-214ENST00000573827 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
SMG6-214ENST00000573827 MUC2Q02817 5179 aa10.31□□□□□ -0.76
SMG6-214ENST00000573827 A0A087X002 238 aa10.31□□□□□ -0.76
SMG6-214ENST00000573827 RPL28P46779 137 aaKnown RBP10.31□□□□□ -0.76
SMG6-214ENST00000573827 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
SMG6-214ENST00000573827 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
SMG6-214ENST00000573827 COX17Q14061 63 aa10.3□□□□□ -0.76
SMG6-214ENST00000573827 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
SMG6-214ENST00000573827 CBLN2Q8IUK8 224 aa10.29□□□□□ -0.76
SMG6-214ENST00000573827 NKAPP1Q8N9T2 125 aa10.29□□□□□ -0.76
SMG6-214ENST00000573827 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
SMG6-214ENST00000573827 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
SMG6-214ENST00000573827 LINC00310P59036 64 aa10.27□□□□□ -0.77
SMG6-214ENST00000573827 IFI27L1Q96BM0 104 aa10.27□□□□□ -0.77
SMG6-214ENST00000573827 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
SMG6-214ENST00000573827 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
SMG6-214ENST00000573827 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
SMG6-214ENST00000573827 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
SMG6-214ENST00000573827 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
SMG6-214ENST00000573827 M0R378 163 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms