RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
TVP23A-207ENST00000573360 LITAFQ99732 161 aa9.74□□□□□ -0.85
TVP23A-207ENST00000573360 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
TVP23A-207ENST00000573360 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
TVP23A-207ENST00000573360 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
TVP23A-207ENST00000573360 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
TVP23A-207ENST00000573360 HERVK_113P63121 156 aa9.72□□□□□ -0.85
TVP23A-207ENST00000573360 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
TVP23A-207ENST00000573360 IGLV4-60A0A075B6I1 120 aa9.72□□□□□ -0.85
TVP23A-207ENST00000573360 H7C423 109 aa9.71□□□□□ -0.85
TVP23A-207ENST00000573360 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.85
TVP23A-207ENST00000573360 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.85
TVP23A-207ENST00000573360 ANK2Q01484 3957 aa9.71□□□□□ -0.85
TVP23A-207ENST00000573360 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
TVP23A-207ENST00000573360 SPANXDQ9BXN6 97 aa9.71□□□□□ -0.86
TVP23A-207ENST00000573360 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
TVP23A-207ENST00000573360 XCL1P47992 114 aa9.7□□□□□ -0.86
TVP23A-207ENST00000573360 WIPF1O43516 503 aa9.7□□□□□ -0.86
TVP23A-207ENST00000573360 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
TVP23A-207ENST00000573360 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
TVP23A-207ENST00000573360 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
TVP23A-207ENST00000573360 TGP01266 2768 aa9.69□□□□□ -0.86
TVP23A-207ENST00000573360 IFITM1P13164 125 aa9.69□□□□□ -0.86
TVP23A-207ENST00000573360 LINC00158P58513 81 aa9.69□□□□□ -0.86
TVP23A-207ENST00000573360 NDUFA1O15239 70 aa9.68□□□□□ -0.86
TVP23A-207ENST00000573360 TIRAPP58753 221 aa9.68□□□□□ -0.86
TVP23A-207ENST00000573360 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
TVP23A-207ENST00000573360 PFN2P35080 140 aa9.67□□□□□ -0.86
TVP23A-207ENST00000573360 B5MCH6 92 aa9.67□□□□□ -0.86
TVP23A-207ENST00000573360 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
TVP23A-207ENST00000573360 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
TVP23A-207ENST00000573360 LINC00269Q8N2A0 174 aa9.66□□□□□ -0.86
TVP23A-207ENST00000573360 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
TVP23A-207ENST00000573360 LST1O00453 97 aa9.66□□□□□ -0.86
TVP23A-207ENST00000573360 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
TVP23A-207ENST00000573360 SS18L2Q9UHA2 77 aa9.65□□□□□ -0.86
TVP23A-207ENST00000573360 H3BT86 120 aa9.64□□□□□ -0.87
TVP23A-207ENST00000573360 EDA2RQ9HAV5 297 aa9.64□□□□□ -0.87
TVP23A-207ENST00000573360 Q9HAA7 133 aa9.64□□□□□ -0.87
TVP23A-207ENST00000573360 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
TVP23A-207ENST00000573360 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
TVP23A-207ENST00000573360 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
TVP23A-207ENST00000573360 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
TVP23A-207ENST00000573360 CRPP02741 224 aa9.63□□□□□ -0.87
TVP23A-207ENST00000573360 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
TVP23A-207ENST00000573360 BAALC-AS2P0C853 105 aa9.62□□□□□ -0.87
TVP23A-207ENST00000573360 TIMM17BO60830 172 aa9.61□□□□□ -0.87
TVP23A-207ENST00000573360 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
TVP23A-207ENST00000573360 DNAL4O96015 105 aa9.61□□□□□ -0.87
TVP23A-207ENST00000573360 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
TVP23A-207ENST00000573360 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
TVP23A-207ENST00000573360 COX7A2LO14548 114 aa9.6□□□□□ -0.87
TVP23A-207ENST00000573360 DNHD1Q96M86 4753 aa9.6□□□□□ -0.87
TVP23A-207ENST00000573360 COX7B2Q8TF08 81 aa9.6□□□□□ -0.87
TVP23A-207ENST00000573360 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
TVP23A-207ENST00000573360 COL7A1Q02388 2944 aa9.6□□□□□ -0.87
TVP23A-207ENST00000573360 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
TVP23A-207ENST00000573360 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
TVP23A-207ENST00000573360 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
TVP23A-207ENST00000573360 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
TVP23A-207ENST00000573360 HERV-K104P63124 156 aa9.57□□□□□ -0.88
TVP23A-207ENST00000573360 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
TVP23A-207ENST00000573360 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
TVP23A-207ENST00000573360 MALP21145 153 aa9.57□□□□□ -0.88
TVP23A-207ENST00000573360 M0QXV9 152 aa9.56□□□□□ -0.88
TVP23A-207ENST00000573360 REG3AQ06141 175 aa9.56□□□□□ -0.88
TVP23A-207ENST00000573360 SS18Q15532 418 aa9.56□□□□□ -0.88
TVP23A-207ENST00000573360 ESRGQ1W209 222 aa9.56□□□□□ -0.88
TVP23A-207ENST00000573360 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
TVP23A-207ENST00000573360 TRAV13-2A0A0B4J235 113 aa9.54□□□□□ -0.88
TVP23A-207ENST00000573360 FAM218AQ96MZ4 157 aa9.54□□□□□ -0.88
TVP23A-207ENST00000573360 CSDC2Q9Y534 153 aaKnown RBP9.53□□□□□ -0.88
TVP23A-207ENST00000573360 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
TVP23A-207ENST00000573360 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
TVP23A-207ENST00000573360 MEGF8Q7Z7M0 2845 aa9.52□□□□□ -0.88
TVP23A-207ENST00000573360 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
TVP23A-207ENST00000573360 LELP1Q5T871 98 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 SLPIP03973 132 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
TVP23A-207ENST00000573360 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
TVP23A-207ENST00000573360 LECT2O14960 151 aa9.51□□□□□ -0.89
TVP23A-207ENST00000573360 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
TVP23A-207ENST00000573360 CCL18P55774 89 aa9.5□□□□□ -0.89
TVP23A-207ENST00000573360 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
TVP23A-207ENST00000573360 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
TVP23A-207ENST00000573360 CMYA5Q8N3K9 4069 aa9.49□□□□□ -0.89
TVP23A-207ENST00000573360 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
TVP23A-207ENST00000573360 TRACP01848 142 aa9.49□□□□□ -0.89
TVP23A-207ENST00000573360 A0A087WYN8 130 aa9.48□□□□□ -0.89
TVP23A-207ENST00000573360 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
TVP23A-207ENST00000573360 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
TVP23A-207ENST00000573360 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.89
TVP23A-207ENST00000573360 CFAP161Q6P656 301 aa9.46□□□□□ -0.89
TVP23A-207ENST00000573360 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
TVP23A-207ENST00000573360 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
TVP23A-207ENST00000573360 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
TVP23A-207ENST00000573360 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms