RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 ORMDL1Q9P0S3 153 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 LINC00527Q9UJ94 153 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 UBE2D4Q9Y2X8 147 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 IGF2RP11717 2491 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 VPS13AQ96RL7 3174 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 MYO9AB2RTY4 2548 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 NBASA2RRP1 2371 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 FRYLO94915 3013 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 DSPP15924 2871 aaKnown RBP1.85□□□□□ -2.11
ERCC4-204ENST00000573018 TRAV13-1A0A0B4J241 112 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 TRBV7-7A0A0K0K1E9 115 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 J3KT08 172 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM256-PLSCR3K7ERE1 68 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 TRBV12-3P01733 135 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 BAALC-AS2P0C853 105 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 RPL28P46779 137 aaKnown RBP1.85□□□□□ -2.11
ERCC4-204ENST00000573018 APOC4P55056 127 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 LINC00315P59091 139 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 BLCAPP62952 87 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 C9orf153Q5TBE3 101 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 Q8N2B8 174 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 LINC00308Q8TCZ7 52 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 TTTY13Q9BZ97 58 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 SND1-IT1Q9HBX3 110 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 ACACBO00763 2458 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 DOPEY1Q5JWR5 2465 aa1.85□□□□□ -2.11
ERCC4-204ENST00000573018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.11
ERCC4-204ENST00000573018 PIEZO1Q92508 2521 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 PRUNE2Q8WUY3 3088 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 ANKRD17O75179 2603 aaKnown RBP1.84□□□□□ -2.11
ERCC4-204ENST00000573018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-73A0A0B4J1V6 119 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 TEX49A0A1B0GTD5 131 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 hADV29S1A0JD25 119 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
ERCC4-204ENST00000573018 LYRM9A8MSI8 78 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 A8MTW9 85 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 MT-ATP8P03928 68 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
ERCC4-204ENST00000573018 DEFB113Q30KQ7 82 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 DEFB121Q5J5C9 76 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 CASC10Q5T4H9 136 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 TOMM7Q9P0U1 55 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 PKIGQ9Y2B9 76 aa1.84□□□□□ -2.11
ERCC4-204ENST00000573018 NAV2Q8IVL1 2488 aa1.84□□□□□ -2.12
ERCC4-204ENST00000573018 TNRC18O15417 2968 aaPredicted RBP1.84□□□□□ -2.12
ERCC4-204ENST00000573018 CACNA1AO00555 2505 aa1.84□□□□□ -2.12
ERCC4-204ENST00000573018 HIVEP3Q5T1R4 2406 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 AKAP6Q13023 2319 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 NBEAQ8NFP9 2946 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 TRBV6-8A0A0A6YYG3 113 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 TRBV10-3A0A0K0K1G6 114 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 FAM236AA0A1B0GUQ0 79 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 FAM236BA0A1B0GV22 79 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 KNCNA6PVL3 124 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 NDUFC2-KCTD14E9PQ53 114 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 NDUFC1O43677 76 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 BCE1O60756 84 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 NDUFC2O95298 119 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 TSPEAR-AS2P59090 65 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 TMEM258P61165 79 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 NPC2P61916 151 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB114Q30KQ6 69 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 Q6JHZ5 121 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 Q8IZM0 81 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 C3orf22Q8N5N4 141 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 DSCR8Q96T75 97 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 CHCHD7Q9BUK0 85 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 CDC42SE2Q9NRR3 84 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 XCL2Q9UBD3 114 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 PRO0255Q9UI72 69 aa1.83□□□□□ -2.12
ERCC4-204ENST00000573018 MYO15AQ9UKN7 3530 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 CHD8Q9HCK8 2581 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 FRYQ5TBA9 3013 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 A0A1B0GW54 56 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 PRB4P10163 310 aaPredicted RBP1.82□□□□□ -2.12
ERCC4-204ENST00000573018 COX7CP15954 63 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 SERP2Q8N6R1 65 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 NKAPP1Q8N9T2 125 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 KIR2DL5BQ8NHK3 375 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 CLEC2BQ92478 149 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 LINC00526Q96FQ7 95 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 C11orf68Q9H3H3 251 aaKnown RBP1.82□□□□□ -2.12
ERCC4-204ENST00000573018 C16orf95Q9H693 158 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 NOP10Q9NPE3 64 aaKnown RBP1.82□□□□□ -2.12
ERCC4-204ENST00000573018 LAMTOR3Q9UHA4 124 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 LRRK2Q5S007 2527 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 SPTBN4Q9H254 2564 aa1.82□□□□□ -2.12
ERCC4-204ENST00000573018 FAM208BQ5VWN6 2430 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 NCOR2Q9Y618 2525 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 CFAP54Q96N23 3096 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 IGKV3OR2-268A0A0C4DH90 116 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 TRBV7-6A0A0J9YX20 115 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 C19orf84I3L1E1 186 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 MIFP14174 115 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 PFN2P35080 140 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 DAD1P61803 113 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 HIST1H4AP62805 103 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms